RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 NAA20P61599 178 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 STXBP1P61764 594 aaKnown RBP10.25□□□□□ -0.77
RTN3-204ENST00000354497 CRYZQ08257 329 aaKnown RBP10.25□□□□□ -0.77
RTN3-204ENST00000354497 ACKR1Q16570 336 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 TRMT5Q32P41 509 aaKnown RBP10.25□□□□□ -0.77
RTN3-204ENST00000354497 NSUN5P2Q63ZY6 315 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 LRRC8EQ6NSJ5 796 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 PPP4R4Q6NUP7 873 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 ZNF595Q8IYB9 648 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 PM20D2Q8IYS1 436 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 SLC22A8Q8TCC7 542 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 SLC2A12Q8TD20 617 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 PTPMT1Q8WUK0 201 aaPredicted RBP10.25□□□□□ -0.77
RTN3-204ENST00000354497 LINGO1Q96FE5 620 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 SMIM10Q96HG1 83 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 CEP19Q96LK0 163 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 CSF3RQ99062 836 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 TIMP4Q99727 224 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 UQCC2Q9BRT2 126 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 ALOXE3Q9BYJ1 711 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 FRMD8P1Q9BZ68 369 aaPredicted RBP10.25□□□□□ -0.77
RTN3-204ENST00000354497 ACKR4Q9NPB9 350 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 THAP1Q9NVV9 213 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 SELENONQ9NZV5 590 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 SLC6A5Q9Y345 797 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 CLDN16Q9Y5I7 305 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 HIVEP2P31629 2446 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 STAB1Q9NY15 2570 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 ARHGAP21Q5T5U3 1957 aa10.25□□□□□ -0.77
RTN3-204ENST00000354497 FAM187AA6NFU0 413 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 KLHL2O95198 593 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 IFNA2P01563 188 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ABCB1P08183 1280 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 SERPINA6P08185 405 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 UBTFL6P0CB48 400 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 SMIM18P0DKX4 95 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ZNF10P21506 573 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 PCYT1AP49585 367 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 MMP16P51512 607 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ID2Q02363 134 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 RGS21Q2M5E4 152 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 CDONQ4KMG0 1287 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 UGT3A1Q6NUS8 523 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 PODNL1Q6PEZ8 512 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 UGT2A3Q6UWM9 527 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 CCBE1Q6UXH8 406 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 VASH1Q7L8A9 365 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 SYCE1Q8N0S2 351 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 LRRC25Q8N386 305 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 LINC00469Q8N7U9 141 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 UBLCP1Q8WVY7 318 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 TMEM158Q8WZ71 300 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 GAL3ST3Q96A11 431 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 NMD3Q96D46 503 aaKnown RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 ZNF597Q96LX8 424 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 SERPINB12Q96P63 405 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 BTBD10Q9BSF8 475 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 DOHHQ9BU89 302 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 NPLQ9BXD5 320 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 TRIM54Q9BYV2 358 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 SHCBP1LQ9BZQ2 653 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 AICDAQ9GZX7 198 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 COPS7BQ9H9Q2 264 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 PELI2Q9HAT8 420 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 C20orf96Q9NUD7 363 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 NDRG3Q9UGV2 375 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ATPIF1Q9UII2 106 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 MAD1L1Q9Y6D9 718 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 TCRBV7S3A2A0A539 114 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 LDB3O75112 727 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ENTPD5O75356 428 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 HAUS5O94927 633 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ACSL3O95573 720 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 CLPTM1O96005 669 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ALOX5P09917 674 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 OCM2P0CE71 109 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 OCMP0CE72 109 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 ETS2P15036 469 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 CERS1P27544 350 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 PLA2G16P53816 162 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 MGAT5Q09328 741 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 FOXF2Q12947 444 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 APOFQ13790 326 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 RCAN2Q14206 197 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 MAPRE2Q15555 327 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ZNF791Q3KP31 576 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 BBS9Q3SYG4 887 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 PIGGQ5H8A4 983 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 C10orf62Q5T681 223 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 NXPE4Q6UWF7 544 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 LINC00299Q6ZSB3 139 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 KLHDC8AQ8IYD2 350 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 SAMD14Q8IZD0 417 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 C9orf106Q8NAJ2 232 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 OR10G3Q8NGC4 313 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 OR8K3Q8NH51 312 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 OR56A3Q8NH54 315 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 PAQR8Q8TEZ7 354 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 SPACA9Q96E40 222 aaPredicted RBP10.24□□□□□ -0.77
RTN3-204ENST00000354497 MAELQ96JY0 434 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms