RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MYEOVQ96EZ4 313 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 PLEKHM1Q9Y4G2 1056 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 K7ESM1 405 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 PLP2Q04941 152 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 CARTPTQ16568 116 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 BIRC8Q96P09 236 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 MYO7AQ13402 2215 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 TRAPPC13A5PLN9 417 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 CKMT1AP12532 417 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 PRKCAP17252 672 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 ADPRHP54922 357 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 CYP4V2Q6ZWL3 525 aaPredicted RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 MFSD9Q8NBP5 474 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 OR4K5Q8NGD3 323 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 CDS1Q92903 461 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 NAA11Q9BSU3 229 aaPredicted RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 HHATLQ9HCP6 504 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 CUTCQ9NTM9 273 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 INTS6Q9UL03 887 aaKnown RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 ATXN7L1Q9ULK2 861 aaPredicted RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 A0A1B0GTW7 788 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 AHRP35869 848 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 CTBP2P56545 445 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 TAS2R43P59537 309 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 GPR18Q14330 331 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 TRIM61Q5EBN2 209 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 ADIPOR2Q86V24 386 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 C19orf47Q8N9M1 422 aaKnown RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 TCTN2Q96GX1 697 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 NARS2Q96I59 477 aaKnown RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 IL21Q9HBE4 155 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 ENPP4Q9Y6X5 453 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 OR3A3P47888 321 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 OR3A2P47893 321 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 IST1P53990 364 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 PIGFQ07326 219 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 FGL2Q14314 439 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 NKAIN2Q5VXU1 208 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 CGB2Q6NT52 195 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF619Q8N2I2 560 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 OR8K3Q8NH51 312 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 TNFAIP8L1Q8WVP5 186 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 THAP4Q8WY91 577 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 HDAC2Q92769 488 aaKnown RBP14.08□□□□□ -0.15
COL17A1-201ENST00000353479 CLCC1Q96S66 551 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 GINS4Q9BRT9 223 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 GAREM1Q9H706 876 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 RNF6Q9Y252 685 aa14.08□□□□□ -0.15
COL17A1-201ENST00000353479 GXYLT2A0PJZ3 443 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 EFCAB7A8K855 629 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 OR7A17O14581 309 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 FRS3O43559 492 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 MS4A2Q01362 244 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 CLEC14AQ86T13 490 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 PSD4Q8NDX1 1056 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 OR4C15Q8NGM1 316 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 ATOH1Q92858 354 aaPredicted RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 PDXPQ96GD0 296 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 NPLQ9BXD5 320 aaPredicted RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 C6orf106Q9H6K1 298 aaPredicted RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 TMEM45AQ9NWC5 275 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 IL20RAQ9UHF4 553 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 GRPRP30550 384 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 SLC15A1P46059 708 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 TRA2BP62995 288 aaKnown RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 ZNF100Q8IYN0 542 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 ANKFN1Q8N957 763 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 NLGN4YQ8NFZ3 816 aaPredicted RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 MMP17Q9ULZ9 603 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 MAT1AQ00266 395 aaKnown RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 TAP2Q03519 686 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 GAS6Q14393 721 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 HENMT1Q5T8I9 393 aaKnown RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 GOLM1Q8NBJ4 401 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 OR2L3Q8NG85 312 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 MSLNLQ96KJ4 702 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 SECISBP2Q96T21 854 aaKnown RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 AP1M2Q9Y6Q5 423 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 CLPXO76031 633 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 H2BFMP0C1H6 154 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 GSTT2BP0CG30 244 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 SOX2P48431 317 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 BCAP31P51572 246 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 RACK1P63244 317 aaKnown RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 PIN1Q13526 163 aaPredicted RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 OR8J1Q8NGP2 316 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 OMA1Q96E52 524 aa14.08□□□□□ -0.16
COL17A1-201ENST00000353479 METTL2AQ96IZ6 378 aaKnown RBP14.08□□□□□ -0.16
COL17A1-201ENST00000353479 FAM172BPA6NC97 362 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 CBFA2T3O75081 653 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 CSN2P05814 226 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 PEPDP12955 493 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 CD27P26842 260 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 SELENOWP63302 87 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 HPS1Q92902 700 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 TRNAU1APQ9NX07 287 aaKnown RBP14.07□□□□□ -0.16
COL17A1-201ENST00000353479 CIB4A0PJX0 185 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 ACOT7O00154 380 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 PCGF2P35227 344 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms