RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 NAGSQ8N159 534 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 CLEC4FQ8N1N0 589 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 AGBL5Q8NDL9 886 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 TSPAN14Q8NG11 270 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 NT5CQ8TCD5 201 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 PNPT1Q8TCS8 783 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 MAGEE2Q8TD90 523 aaPredicted RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 ADAMTS16Q8TE57 1224 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 TSACCQ96A04 125 aaPredicted RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 GAL3ST3Q96A11 431 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 CIDECQ96AQ7 238 aaPredicted RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 ARSGQ96EG1 525 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 THAP11Q96EK4 314 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 ZBED6CLQ96FA7 236 aaPredicted RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 HSH2DQ96JZ2 352 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 TEFMQ96QE5 360 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 F2RL3Q96RI0 385 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 NRTNQ99748 197 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 DPH2Q9BQC3 489 aaPredicted RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 FAIM2Q9BWQ8 316 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 SORBS1Q9BX66 1292 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 AICDAQ9GZX7 198 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 CXXC4Q9H2H0 198 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 XKR8Q9H6D3 395 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 A4GALTQ9NPC4 353 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 PRDM9Q9NQV7 894 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 C1GALT1Q9NS00 363 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 THUMPD1Q9NXG2 353 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 AKAP7Q9P0M2 348 aaPredicted RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 MOSPD1Q9UJG1 213 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 ANGPT4Q9Y264 503 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 ZNF451Q9Y4E5 1061 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 PCDHGB6Q9Y5F9 930 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 OR2A25A4D2G3 310 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 TMEM229AB2RXF0 380 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 GNGT2O14610 69 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 HAT1O14929 419 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 GCM2O75603 506 aaPredicted RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 ZNF682O95780 498 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 IFNA14P01570 189 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 C1QCP02747 245 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 GNAO1P09471 354 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ETFAP13804 333 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ZNF28P17035 718 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 EFNA1P20827 205 aaPredicted RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 DLSTP36957 453 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ACTR1BP42025 376 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 SSR2P43308 183 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ALDH3B2P48448 385 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 CCL11P51671 97 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 CRYBA2P53672 197 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 SH3BGRP55822 239 aaPredicted RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 PCBP3P57721 371 aaKnown RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 ACTR1AP61163 376 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 STXBP1P61764 594 aaKnown RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 KCNJ10P78508 379 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 TGM3Q08188 693 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ILF3Q12906 894 aaKnown RBP eCLIP7.69□□□□□ -1.18
CD44-205ENST00000352818 SCARB2Q14108 478 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 NR1D2Q14995 579 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 SLC5A12Q1EHB4 618 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 NKAIN2Q5VXU1 208 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ABHD17CQ6PCB6 329 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 IYDQ6PHW0 289 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 TTC33Q6PID6 262 aaPredicted RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 SPESP1Q6UW49 350 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 TMEM64Q6YI46 380 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ZNF793Q6ZN11 406 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ADCK2Q7Z695 626 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 NRROSQ86YC3 692 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ALDH16A1Q8IZ83 802 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 METTL25Q8N6Q8 603 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ST6GALNAC3Q8NDV1 305 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 OR2L5Q8NG80 312 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 FLVCR1-AS1Q8TAF5 88 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 SFXN5Q8TD22 340 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 CYGBQ8WWM9 190 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 LCN9Q8WX39 176 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 NCSTNQ92542 709 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 MS4A6EQ96DS6 147 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 C7orf34Q96L11 122 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 KCNC2Q96PR1 638 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 MBOAT4Q96T53 435 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 EPYCQ99645 322 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 DPH7Q9BTV6 452 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 DOHHQ9BU89 302 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 NUDT9Q9BW91 350 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 NLNQ9BYT8 704 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ROGDIQ9GZN7 287 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 RBM38Q9H0Z9 239 aaKnown RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 CXorf36Q9H7Y0 433 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 SIRT3Q9NTG7 399 aaPredicted RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 POT1Q9NUX5 634 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 DDX18Q9NVP1 670 aaKnown RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 LYARQ9NX58 379 aaKnown RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 SPHK1Q9NYA1 384 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ZNF624Q9P2J8 865 aaPredicted RBP7.69□□□□□ -1.18
CD44-205ENST00000352818 C3orf18Q9UK00 162 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 UTS2RQ9UKP6 389 aa7.69□□□□□ -1.18
CD44-205ENST00000352818 ABCG2Q9UNQ0 655 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms