RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 DRD2P14416 443 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 RBMS1P29558 406 aaKnown RBP9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 STAT5AP42229 794 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 MEF2AQ02078 507 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CST9Q5W186 159 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CDC73Q6P1J9 531 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TRILQ7L0X0 811 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TRMT11Q7Z4G4 463 aaKnown RBP9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CDH24Q86UP0 819 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 FAM129CQ86XR2 697 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ZNF485Q8NCK3 441 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 PIGXQ8TBF5 258 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SFXN5Q8TD22 340 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 XAGE5Q8WWM1 108 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 RGMAQ96B86 450 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 LINC00615Q96LM1 132 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 MS4A8Q9BY19 250 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SLC28A3Q9HAS3 691 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 B3GAT2Q9NPZ5 323 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SLAMF7Q9NQ25 335 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 H2AFY2Q9P0M6 372 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TRPC4Q9UBN4 977 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 IL36AQ9UHA7 158 aa9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 EXOGQ9Y2C4 368 aaKnown RBP9.54□□□□□ -0.88
TRAPPC6B-202ENST00000347691 M0R3H8 397 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 RPN2P04844 631 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 HMGN1P05114 100 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CHRM5P08912 532 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 OR12D1P0DN82 309 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 PEPDP12955 493 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 STOMP27105 288 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SLC6A1P30531 599 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 NTSP30990 170 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 BSGP35613 385 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 MMP12P39900 470 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 AVPR1BP47901 424 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 IKZF1Q13422 519 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ARHGAP19Q14CB8 494 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 P2RY14Q15391 338 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TRAM1Q15629 374 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 WDR45BQ5MNZ6 344 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SPOUT1Q5T280 376 aaKnown RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ZBTB37Q5TC79 503 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 LIPIQ6XZB0 460 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TMEM64Q6YI46 380 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 AMIGO1Q86WK6 493 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TMC8Q8IU68 726 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TRAPPC5Q8IUR0 188 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 RFT1Q96AA3 541 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 FAIM2Q9BWQ8 316 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SPNS1Q9H2V7 528 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 KRCC1Q9NPI7 259 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 MAN2C1Q9NTJ4 1040 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 COPZ2Q9P299 210 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 MALT1Q9UDY8 824 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SRRDQ9UH36 339 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 NUP50Q9UKX7 468 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 NUP210Q8TEM1 1887 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TMEM88BA6NKF7 163 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 FAM170BA6NMN3 283 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CD53P19397 219 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 OPRD1P41143 372 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 RNF144AP50876 292 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TAS2R41P59536 307 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ST3GAL3Q11203 375 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SYPL1Q16563 259 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ARSIQ5FYB1 569 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 HBMQ6B0K9 141 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ANKRD54Q6NXT1 300 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ZNF765Q7L2R6 523 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 OR5M3Q8NGP4 307 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 EXOSC8Q96B26 276 aaKnown RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ZNF558Q96NG5 402 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 GFM1Q96RP9 751 aaKnown RBP9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TMED9Q9BVK6 235 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TBC1D17Q9HA65 648 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CALML5Q9NZT1 146 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 EXTL2Q9UBQ6 330 aa9.53□□□□□ -0.88
TRAPPC6B-202ENST00000347691 A0A0X1KG70 313 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 LINC00862A6NCI5 91 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ZSCAN5BA6NJL1 495 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 IGHA1P01876 353 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CELP19835 753 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ACSL1P33121 698 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CAPZA2P47755 286 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 SLC6A11P48066 632 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 CSTF1Q05048 431 aaKnown RBP9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 KLHL12Q53G59 568 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 LAMTOR1Q6IAA8 161 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TMEM107Q6UX40 140 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 ADGRF3Q8IZF5 1079 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 MMP21Q8N119 569 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 C9orf62Q8N4C0 152 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 TOR1AIP2Q8NFQ8 470 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 OR8H1Q8NGG4 311 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 UCN3Q969E3 161 aa9.52□□□□□ -0.88
TRAPPC6B-202ENST00000347691 GPR137Q96N19 417 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms