RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 EXOSC8Q96B26 276 aaKnown RBP16.76■□□□□ 0.27
VHL-202ENST00000345392 CREB3L1Q96BA8 519 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 ZNF607Q96SK3 696 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 SERHL2Q9H4I8 314 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 UCKL1Q9NWZ5 548 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 LSM7Q9UK45 103 aaKnown RBP16.76■□□□□ 0.27
VHL-202ENST00000345392 U3KQ87 197 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 A0A1W2PRQ8 180 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 QSOX1O00391 747 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 HRO43593 1189 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 LZTS3O60299 673 aaPredicted RBP16.76■□□□□ 0.27
VHL-202ENST00000345392 EFEMP2O95967 443 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 ZNF250P15622 560 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 NAT1P18440 290 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 PTGER1P34995 402 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 SLC1A3P43003 542 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 SMIM11AP58511 58 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 COX10Q12887 443 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 TMEM115Q12893 351 aaPredicted RBP16.76■□□□□ 0.27
VHL-202ENST00000345392 ADAM15Q13444 863 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 IDNKQ5T6J7 187 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 RAET1GQ6H3X3 334 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 SLC36A4Q6YBV0 504 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 NR2C2APQ86WQ0 139 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 CFAP206Q8IYR0 622 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 OR11H4Q8NGC9 324 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 OR8D4Q8NGM9 314 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 NRTNQ99748 197 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 MED28Q9H204 178 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 MRPL17Q9NRX2 175 aaKnown RBP16.76■□□□□ 0.27
VHL-202ENST00000345392 SAGE1Q9NXZ1 904 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 ICKQ9UPZ9 632 aa16.76■□□□□ 0.27
VHL-202ENST00000345392 HOXA2O43364 376 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 PDGFAP04085 211 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 SLC6A1P30531 599 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 POU4F3Q15319 338 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 KIAA1161Q6NSJ0 714 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 KLHDC8AQ8IYD2 350 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 ZNF366Q8N895 744 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 ZNF485Q8NCK3 441 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 C7orf57Q8NEG2 295 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 ZNF680Q8NEM1 530 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 OR6C4Q8NGE1 309 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 LRRC20Q8TCA0 184 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 SLC5A11Q8WWX8 675 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 OTULINQ96BN8 352 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 EVA1BQ9NVM1 165 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 CNIH4Q9P003 139 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 MYO7AQ13402 2215 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 GSAPA4D1B5 854 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 I3L521 148 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 MMP20O60882 483 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 SOD2P04179 222 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 SYPP08247 313 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 CTSAP10619 480 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 POU6F2P78424 691 aaPredicted RBP16.75■□□□□ 0.27
VHL-202ENST00000345392 TAP2Q03519 686 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 ARHGEF6Q15052 776 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 PXDC1Q5TGL8 231 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 MZT2AQ6P582 158 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 NXPE4Q6UWF7 544 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 GDPD4Q6W3E5 623 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 MORN4Q8NDC4 146 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 OR11H7Q8NGC8 314 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 IL17FQ96PD4 163 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 ARPC5LQ9BPX5 153 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 TRAF4Q9BUZ4 470 aaPredicted RBP16.75■□□□□ 0.27
VHL-202ENST00000345392 ABCG5Q9H222 651 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 TAS2R7Q9NYW3 318 aa16.75■□□□□ 0.27
VHL-202ENST00000345392 EIF3KQ9UBQ5 218 aaKnown RBP16.75■□□□□ 0.27
VHL-202ENST00000345392 EXOSC1Q9Y3B2 195 aaKnown RBP16.75■□□□□ 0.27
VHL-202ENST00000345392 KIAA0100Q14667 2235 aaKnown RBP16.75■□□□□ 0.27
VHL-202ENST00000345392 NNMTP40261 264 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 SRP9P49458 86 aaKnown RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 DBPQ10586 325 aaPredicted RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 CNTN1Q12860 1018 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 C1orf94Q6P1W5 598 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 KRT74Q7RTS7 529 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 FBXL6Q8N531 539 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 TBC1D19Q8N5T2 526 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 ART5Q96L15 291 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 CPEB1Q9BZB8 566 aaKnown RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 ZFP64Q9NPA5 681 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 SIRT3Q9NTG7 399 aaPredicted RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 TRPC4Q9UBN4 977 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 ELF5Q9UKW6 265 aaPredicted RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 ING4Q9UNL4 249 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 PLPP1O14494 284 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 CDK2AP1O14519 115 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 PDPK1O15530 556 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 EPPINO95925 133 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 HLA-DPB1P04440 258 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 DDCP20711 480 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 PNLIPRP1P54315 467 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 ZNF155Q12901 538 aaPredicted RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 MINDY4Q4G0A6 757 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 HENMT1Q5T8I9 393 aaKnown RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 SLC27A4Q6P1M0 643 aa16.74■□□□□ 0.27
VHL-202ENST00000345392 METTL3Q86U44 580 aaKnown RBP16.74■□□□□ 0.27
VHL-202ENST00000345392 SLC9B2Q86UD5 537 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms