RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 PCLAFQ15004 111 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 KIAA0040Q15053 153 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 NHSL2Q5HYW2 709 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 NOXRED1Q6NXP6 359 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 TMEM64Q6YI46 380 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 C10orf107Q8IVU9 208 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 PM20D2Q8IYS1 436 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 HGDQ93099 445 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 TMCO6Q96DC7 493 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 OMA1Q96E52 524 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 SLC35A4Q96G79 324 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 JSRP1Q96MG2 331 aaPredicted RBP18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 VSTM2LQ96N03 204 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 TTYH2Q9BSA4 534 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 METTL7AQ9H8H3 244 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 EML4Q9HC35 981 aaKnown RBP18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 SLC24A3Q9HC58 644 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 C1orf109Q9NX04 203 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 SENP1Q9P0U3 644 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 C15orf41Q9Y2V0 281 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 TMED5Q9Y3A6 229 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 NINQ8N4C6 2090 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 MYO9AB2RTY4 2548 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 TTC36A6NLP5 189 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 ZNF500O60304 480 aaPredicted RBP18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 SLU7O95391 586 aaKnown RBP18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 TUBBP07437 444 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 MRPS35P82673 323 aaKnown RBP18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 LTB4RQ15722 352 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 FNDC7Q5VTL7 733 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 ZNF585AQ6P3V2 769 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 SCIMPQ6UWF3 145 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 MREGQ8N565 214 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 OR9A2Q8NGT5 310 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 COL21A1Q96P44 957 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 GATA5Q9BWX5 397 aaPredicted RBP18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 EBPLQ9BY08 206 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 KCNJ16Q9NPI9 418 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 RNF6Q9Y252 685 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 ABCA12Q86UK0 2595 aa18.34■□□□□ 0.53
CEACAM3-201ENST00000344550 APCP25054 2843 aa18.33■□□□□ 0.53
CEACAM3-201ENST00000344550 TBX19O60806 448 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 SEC22BO75396 215 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 ERN1O75460 977 aaKnown RBP18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 CT45A8P0DMV1 189 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 CT45A9P0DMV2 189 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 DDX5P17844 614 aaKnown RBP18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 ENDOUP21128 410 aaKnown RBP18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 SSTR2P30874 369 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 NTSP30990 170 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 PNLIPRP2P54317 469 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 NUP107P57740 925 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 CDSNQ15517 529 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 CT45A2Q5DJT8 189 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 C1orf185Q5T7R7 199 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 OR5M9Q8NGP3 310 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 OR1J4Q8NGS1 313 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 C14orf79Q96F83 325 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 FCRL1Q96LA6 429 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 CCT7Q99832 543 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 LRTM1Q9HBL6 345 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 SPRR3Q9UBC9 169 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 EXO1Q9UQ84 846 aaKnown RBP18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 FAM215AQ9Y5M1 114 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 ADGRG4Q8IZF6 3080 aa18.33■□□□□ 0.52
CEACAM3-201ENST00000344550 SNPHO15079 494 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 ICOSLGO75144 302 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 CBR3O75828 277 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 GLI4P10075 376 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 GCKP35557 465 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 KRT20P35900 424 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 CYP27C1Q4G0S4 372 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 RIPPLY2Q5TAB7 128 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 VASNQ6EMK4 673 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 FAM180BQ6P0A1 224 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 NCCRP1Q6ZVX7 275 aaPredicted RBP18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 PRR22Q8IZ63 422 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 CLYBLQ8N0X4 340 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 GNRHR2Q96P88 292 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 OSBPL11Q9BXB4 747 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 C19orf53Q9UNZ5 99 aaPredicted RBP18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 MRPS18CQ9Y3D5 142 aaKnown RBP18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 LRBAP50851 2863 aa18.32■□□□□ 0.52
CEACAM3-201ENST00000344550 EXPH5Q8NEV8 1989 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 PRAMEF25A6NGN4 478 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 UGT2B11O75310 529 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 TRAPPC6AO75865 159 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 ACTL6AO96019 429 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 PRF1P14222 555 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 PTPN6P29350 595 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 KIR3DL1P43629 444 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 ZFP36L2P47974 494 aaKnown RBP18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 NCBP2P52298 156 aaKnown RBP eCLIP18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 SLC25A35Q3KQZ1 300 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 KANK2Q63ZY3 851 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 RTL6Q6ICC9 239 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 SRRM1Q8IYB3 904 aaKnown RBP18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 ULK2Q8IYT8 1036 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 OR2L13Q8N349 312 aa18.31■□□□□ 0.52
CEACAM3-201ENST00000344550 SIMC1Q8NDZ2 872 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms