RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GNAO1P09471 354 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 SOAT1P35610 550 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 E2F1Q01094 437 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 MC2RQ01718 297 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 MGAT2Q10469 447 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 IL11RAQ14626 422 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF846Q147U1 533 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 TRIP6Q15654 476 aaKnown RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 FGD3Q5JSP0 725 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 RBM48Q5RL73 367 aaKnown RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 TMEM107Q6UX40 140 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 GLRX5Q86SX6 157 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 PPP1R3BQ86XI6 285 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF595Q8IYB9 648 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 OR7G2Q8NG99 324 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 OR52N2Q8NGI0 321 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 DOK4Q8TEW6 326 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 KAT2AQ92830 837 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 EFHD2Q96C19 240 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ELP4Q96EB1 424 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 RDH12Q96NR8 316 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 AKIRIN1Q9H9L7 192 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 FBXO8Q9NRD0 319 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 GVINP1Q7Z2Y8 2422 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 FAM220BPB1ANY3 271 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ACOX3O15254 700 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 CNOT3O75175 753 aaKnown RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 NME6O75414 186 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 DKK1O94907 266 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 LDLRP01130 860 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ETFAP13804 333 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF28P17035 718 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 MAOAP21397 527 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 RORAP35398 523 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 MC3RP41968 323 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 RPS26P62854 115 aaKnown RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ISXQ2M1V0 245 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 TRIM16LQ309B1 348 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF628Q5EBL2 1059 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 VWA2Q5GFL6 755 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 LCN10Q6JVE6 187 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 TMEM64Q6YI46 380 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 C6orf120Q7Z4R8 191 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ZC3H7AQ8IWR0 971 aaKnown RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ZZZ3Q8IYH5 903 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 SAMD14Q8IZD0 417 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ADAMTS18Q8TE60 1221 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 MAL2Q969L2 176 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 COL26A1Q96A83 441 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 WDR12Q9GZL7 423 aaKnown RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 NECTIN3Q9NQS3 549 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 GIMAP4Q9NUV9 329 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 NTMQ9P121 344 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 TRPC4Q9UBN4 977 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 OAZ3Q9UMX2 235 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF232Q9UNY5 417 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 PCDHGA1Q9Y5H4 931 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 DMXL1Q9Y485 3027 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-201ENST00000343575 UPK1AO00322 258 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 POLR1CO15160 346 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-201ENST00000343575 ONECUT2O95948 504 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 CT62P0C5K7 136 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 GGT1P19440 569 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 ITIH1P19827 911 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 PPP2R1BP30154 601 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 ETV5P41161 510 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 FOXL2P58012 376 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 ADARB1P78563 741 aaKnown RBP13.73□□□□□ -0.21
CXCL12-201ENST00000343575 OCA2Q04671 838 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 VAC14Q08AM6 782 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 EPS8Q12929 822 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 PRICKLE4Q2TBC4 344 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 TRMT12Q53H54 448 aaKnown RBP13.73□□□□□ -0.21
CXCL12-201ENST00000343575 CYBRD1Q53TN4 286 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 FHL5Q5TD97 284 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 FAM111BQ6SJ93 734 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 DHRS13Q6UX07 377 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 LAPTM4BQ86VI4 370 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 BPHLQ86WA6 291 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-201ENST00000343575 MICU2Q8IYU8 434 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 DEFB124Q8NES8 71 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 S100ZQ8WXG8 99 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 CTHRC1Q96CG8 243 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 GIMAP5Q96F15 307 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 OR1F2PQ96R84 312 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 PSD2Q9BQI7 771 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 BDH2Q9BUT1 245 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 ASPSCR1Q9BZE9 553 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 RAD21L1Q9H4I0 556 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 HMG20AQ9NP66 347 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 PRTFDC1Q9NRG1 225 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 CTSFQ9UBX1 484 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 RAPGEFL1Q9UHV5 662 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 ANAPC2Q9UJX6 822 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 AP3M1Q9Y2T2 418 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms