RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CNPPD1Q9BV87 410 aa15.34■□□□□ 0.05
LITAF-201ENST00000339430 TSSK6Q9BXA6 273 aa15.34■□□□□ 0.05
LITAF-201ENST00000339430 TPSD1Q9BZJ3 242 aa15.34■□□□□ 0.05
LITAF-201ENST00000339430 PITHD1Q9GZP4 211 aaPredicted RBP15.34■□□□□ 0.05
LITAF-201ENST00000339430 TAS2R7Q9NYW3 318 aa15.34■□□□□ 0.05
LITAF-201ENST00000339430 CA5BQ9Y2D0 317 aa15.34■□□□□ 0.05
LITAF-201ENST00000339430 FRS3O43559 492 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 TLX2O43763 284 aaPredicted RBP15.33■□□□□ 0.04
LITAF-201ENST00000339430 PRKYO43930 277 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 ALOX12P18054 663 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 HIST1H1TP22492 207 aaPredicted RBP15.33■□□□□ 0.04
LITAF-201ENST00000339430 TEAD1P28347 426 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 EIF2B2P49770 351 aaKnown RBP15.33■□□□□ 0.04
LITAF-201ENST00000339430 KHKP50053 298 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 CLDN2P57739 230 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 ZNF91Q05481 1191 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 DMPKQ09013 629 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 DGLUCYQ7Z3D6 616 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 ZER1Q7Z7L7 766 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 OR4K5Q8NGD3 323 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 OR2L8Q8NGY9 312 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 SUN3Q8TAQ9 357 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 RLN3Q8WXF3 142 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 TMEM80Q96HE8 168 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 C6orf106Q9H6K1 298 aaPredicted RBP15.33■□□□□ 0.04
LITAF-201ENST00000339430 HHATLQ9HCP6 504 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 MAN2C1Q9NTJ4 1040 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 ASB4Q9Y574 426 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 POM121BA6NF01 834 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 TAF4O00268 1085 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 WWP2O00308 870 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 ATP6V1G1O75348 118 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 AIFM1O95831 613 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 PIPP12273 146 aaPredicted RBP15.33■□□□□ 0.04
LITAF-201ENST00000339430 PEBP1P30086 187 aaKnown RBP15.33■□□□□ 0.04
LITAF-201ENST00000339430 CSTF2P33240 577 aaKnown RBP eCLIP15.33■□□□□ 0.04
LITAF-201ENST00000339430 TRA2BP62995 288 aaKnown RBP15.33■□□□□ 0.04
LITAF-201ENST00000339430 ZIC1Q15915 447 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 CARTPTQ16568 116 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 AGAP7PQ5VUJ5 663 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 FAM92BQ6ZTR7 304 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 HPS1Q92902 700 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 TAPBPLQ9BX59 468 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 PRDM7Q9NQW5 492 aa15.33■□□□□ 0.04
LITAF-201ENST00000339430 H0Y8X5 98 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 NTN1O95631 604 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 IGLV3-19P01714 112 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 IMPDH2P12268 514 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 ATP5A1P25705 553 aaKnown RBP15.32■□□□□ 0.04
LITAF-201ENST00000339430 SOX6P35712 828 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 GSTM5P46439 218 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 ABHD17CQ6PCB6 329 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 FAM160A2Q8N612 972 aaPredicted RBP15.32■□□□□ 0.04
LITAF-201ENST00000339430 OR2L3Q8NG85 312 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 ASB12Q8WXK4 309 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 ZNF764Q96H86 408 aaPredicted RBP15.32■□□□□ 0.04
LITAF-201ENST00000339430 FCRL4Q96PJ5 515 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 APOOQ9BUR5 198 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 NUAK2Q9H093 628 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 SLC9A8Q9Y2E8 581 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 CTDSP2O14595 271 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 KDM1AO60341 852 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 APOL3O95236 402 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 SMIM11AP58511 58 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 GINS1Q14691 196 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 SPHARQ15513 63 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 TMEM35AQ53FP2 167 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 MFSD4BQ5TF39 518 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 ACSM5Q6NUN0 579 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 C19orf48Q6RUI8 117 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 RBM12BQ8IXT5 1001 aaKnown RBP15.32■□□□□ 0.04
LITAF-201ENST00000339430 GJD3Q8N144 294 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 TTLQ8NG68 377 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 OR8J1Q8NGP2 316 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 INIPQ9NRY2 104 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 EHD3Q9NZN3 535 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 NDOR1Q9UHB4 597 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 ENTPD4Q9Y227 616 aa15.32■□□□□ 0.04
LITAF-201ENST00000339430 LSM2Q9Y333 95 aaKnown RBP15.32■□□□□ 0.04
LITAF-201ENST00000339430 A0A1W2PRQ8 180 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 GPR89AB7ZAQ6 455 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 DLGAP3O95886 979 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 LGI1O95970 557 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 SCG5P05408 212 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 DCNP07585 359 aaKnown RBP15.31■□□□□ 0.04
LITAF-201ENST00000339430 CHRM5P08912 532 aaPredicted RBP15.31■□□□□ 0.04
LITAF-201ENST00000339430 GPR89BP0CG08 455 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 MC3RP41968 323 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 ZNF181Q2M3W8 571 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 TIMM50Q3ZCQ8 353 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 TMEM201Q5SNT2 666 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 TUBA3EQ6PEY2 450 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 BBS10Q8TAM1 723 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 ZG16BQ96DA0 208 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 TRMT61AQ96FX7 289 aaKnown RBP15.31■□□□□ 0.04
LITAF-201ENST00000339430 TIMM29Q9BSF4 260 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 GPR174Q9BXC1 333 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 CHRDQ9H2X0 955 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 EGLN3Q9H6Z9 239 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 APOBEC3BQ9UH17 382 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms