RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
PCDH8-201ENST00000338862 PIGXQ8TBF5 258 aa13.36□□□□□ -0.27
PCDH8-201ENST00000338862 C2orf15Q8WU43 125 aaKnown RBP13.36□□□□□ -0.27
PCDH8-201ENST00000338862 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
PCDH8-201ENST00000338862 TIFAQ96CG3 184 aa13.36□□□□□ -0.27
PCDH8-201ENST00000338862 NARS2Q96I59 477 aaKnown RBP13.36□□□□□ -0.27
PCDH8-201ENST00000338862 IFT27Q9BW83 186 aa13.36□□□□□ -0.27
PCDH8-201ENST00000338862 SLC46A2Q9BY10 475 aa13.36□□□□□ -0.27
PCDH8-201ENST00000338862 BRD7Q9NPI1 651 aa13.36□□□□□ -0.27
PCDH8-201ENST00000338862 TDP1Q9NUW8 608 aa13.36□□□□□ -0.27
PCDH8-201ENST00000338862 SOCS6O14544 535 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 C1orf105O95561 183 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 HMGN2P05204 90 aaKnown RBP13.35□□□□□ -0.27
PCDH8-201ENST00000338862 IFNGR2P38484 337 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 RHAGQ02094 409 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 HYAL2Q12891 473 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 TEAD2Q15562 447 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 MPEG1Q2M385 716 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 C11orf88Q6PI97 169 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SLC36A4Q6YBV0 504 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 LRRTM4Q86VH4 590 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 TOMM5Q8N4H5 51 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 OR4D11Q8NGI4 311 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SLC25A46Q96AG3 418 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SLA2Q9H6Q3 261 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 HMX1Q9NP08 348 aaPredicted RBP13.35□□□□□ -0.27
PCDH8-201ENST00000338862 RDH8Q9NYR8 311 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 TBC1D3BA6NDS4 549 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 ERVH48-1M5A8F1 160 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 AKAP8O43823 692 aaKnown RBP13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SLC35G4P0C7Q5 338 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 PRKACBP22694 351 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SHC1P29353 583 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 GRPRP30550 384 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 PYCR1P32322 319 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 MLLT11Q13015 90 aaPredicted RBP13.35□□□□□ -0.27
PCDH8-201ENST00000338862 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 GCDHQ92947 438 aaPredicted RBP13.35□□□□□ -0.27
PCDH8-201ENST00000338862 ZG16BQ96DA0 208 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SAMD8Q96LT4 415 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SCN2AQ99250 2005 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 MYO16Q9Y6X6 1858 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 GIFP27352 417 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 GCGRP47871 477 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 CENPAP49450 140 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SP3Q02447 781 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 PRSS53Q2L4Q9 553 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 CCNJQ5T5M9 372 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SLC8B1Q6J4K2 584 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 LINGO2Q7L985 606 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 AMER3Q8N944 861 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 GPR32P1Q8NGA4 272 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 FIBINQ8TAL6 211 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SETD6Q8TBK2 473 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 MIXL1Q9H2W2 232 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 CWH43Q9H720 699 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 SLAMF7Q9NQ25 335 aa13.35□□□□□ -0.27
PCDH8-201ENST00000338862 UNCXA6NJT0 531 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 H0YC42 278 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 EIF3FO00303 357 aaPredicted RBP13.34□□□□□ -0.27
PCDH8-201ENST00000338862 CCR6P51684 374 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 PPP3R1P63098 170 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 OC90Q02509 493 aaPredicted RBP13.34□□□□□ -0.27
PCDH8-201ENST00000338862 BICRALQ6AI39 1079 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
PCDH8-201ENST00000338862 RPTNQ6XPR3 784 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 CHCHD4Q8N4Q1 142 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 CEP76Q8TAP6 659 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 MKRN2Q9H000 416 aaKnown RBP13.34□□□□□ -0.27
PCDH8-201ENST00000338862 EVA1BQ9NVM1 165 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 FTSJ1Q9UET6 329 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 IL36AQ9UHA7 158 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 SLC23A1Q9UHI7 598 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 RASD1Q9Y272 281 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 OR51B4Q9Y5P0 310 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 A0A075B6Q4 140 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 GABRPO00591 440 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 MID1O15344 667 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 NDUFS4O43181 175 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 GKN3PP0CG01 181 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 ACVR2AP27037 513 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 BNC1Q01954 994 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 NDUFAF5Q5TEU4 345 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 FAM46CQ5VWP2 391 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 RNF44Q7L0R7 432 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 OR52L1Q8NGH7 329 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 OR4C15Q8NGM1 316 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 RASSF5Q8WWW0 418 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 RFT1Q96AA3 541 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 ORAI1Q96D31 301 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 DEFB118Q96PH6 123 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 MCHR1Q99705 422 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 DPH7Q9BTV6 452 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 GSDMCQ9BYG8 508 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 EXO1Q9UQ84 846 aaKnown RBP13.34□□□□□ -0.27
PCDH8-201ENST00000338862 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 PLA2G10O15496 165 aa13.34□□□□□ -0.27
PCDH8-201ENST00000338862 ZNF780AO75290 641 aaPredicted RBP13.34□□□□□ -0.27
PCDH8-201ENST00000338862 TIMP2P16035 220 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms