RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 TMEM107Q6UX40 140 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 VASH1Q7L8A9 365 aaPredicted RBP13.39□□□□□ -0.27
LIPA-202ENST00000336233 OLIG3Q7RTU3 272 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 PHC2Q8IXK0 858 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 CLIP4Q8N3C7 705 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 OR9Q1Q8NGQ5 310 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 TMEM163Q8TC26 289 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 CNPPD1Q9BV87 410 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 C1QTNF7Q9BXJ2 289 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 PLA2G2FQ9BZM2 168 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 SLC38A1Q9H2H9 487 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 GIMAP4Q9NUV9 329 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 APOBEC3BQ9UH17 382 aaKnown RBP13.39□□□□□ -0.27
LIPA-202ENST00000336233 SNX7Q9UNH6 387 aa13.39□□□□□ -0.27
LIPA-202ENST00000336233 OR52A4PA6NMU1 304 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 DNTTP04053 509 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 CPEP16870 476 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 MPIP34949 423 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 RPS19P39019 145 aaKnown RBP13.38□□□□□ -0.27
LIPA-202ENST00000336233 BUD31P41223 144 aaPredicted RBP13.38□□□□□ -0.27
LIPA-202ENST00000336233 DEFA1P59665 94 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 DEFA3P59666 94 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 STXBP1P61764 594 aaKnown RBP13.38□□□□□ -0.27
LIPA-202ENST00000336233 COPZ1P61923 177 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 FAM20CQ8IXL6 584 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 CCDC116Q8IYX3 515 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 ELP4Q96EB1 424 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 BARHL1Q9BZE3 327 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 POLR2J2Q9GZM3 115 aaKnown RBP13.38□□□□□ -0.27
LIPA-202ENST00000336233 SPHK1Q9NYA1 384 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 NTMQ9P121 344 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 RBMX2Q9Y388 322 aaKnown RBP13.38□□□□□ -0.27
LIPA-202ENST00000336233 NINQ8N4C6 2090 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 STK25O00506 426 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 ALPPP05187 535 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 ALOX12P18054 663 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 ENPP1P22413 925 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 PRKAR1BP31321 381 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 SEPHS1P49903 392 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 PRKAG1P54619 331 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 BNC1Q01954 994 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 TGM3Q08188 693 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 RAB40BQ12829 278 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 TSPAN31Q12999 210 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 LRRC32Q14392 662 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 TRAM2Q15035 370 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 ZNF750Q32MQ0 723 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 GPAT3Q53EU6 434 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 C18orf63Q68DL7 685 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 SLC36A4Q6YBV0 504 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 BCDIN3DQ7Z5W3 292 aaKnown RBP13.38□□□□□ -0.27
LIPA-202ENST00000336233 UBE2Q1Q7Z7E8 422 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 NRROSQ86YC3 692 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 YAF2Q8IY57 180 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 DIO2Q92813 273 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 HPS1Q92902 700 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 C16orf58Q96GQ5 468 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 LRR1Q96L50 414 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 YIPF4Q9BSR8 244 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 APOOQ9BUR5 198 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 SLC17A9Q9BYT1 436 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 SYNPO2LQ9H987 977 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 KCNE3Q9Y6H6 103 aa13.38□□□□□ -0.27
LIPA-202ENST00000336233 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 A0A087WUU8 490 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 A0A1W2PQU0 124 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 TMEM129A0AVI4 362 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 PRODHO43272 600 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 UBXN7O94888 489 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 STATHP02808 62 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 ACP2P11117 423 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 SPNP16150 400 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 RORCP51449 518 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 HEPHL1Q6MZM0 1159 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 RASSF6Q6ZTQ3 369 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 PAQR7Q86WK9 346 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 CACTIN-AS1Q8N1I8 211 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 NUP43Q8NFH3 380 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 SETD6Q8TBK2 473 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 NT5CQ8TCD5 201 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 HTRA1Q92743 480 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 KLK6Q92876 244 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 GAL3ST3Q96A11 431 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 GIMAP5Q96F15 307 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 OTUB1Q96FW1 271 aaPredicted RBP13.37□□□□□ -0.27
LIPA-202ENST00000336233 TRMT61AQ96FX7 289 aaKnown RBP13.37□□□□□ -0.27
LIPA-202ENST00000336233 MACROD1Q9BQ69 325 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 TWSG1Q9GZX9 223 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 SSR3Q9UNL2 185 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 SNTNA6NMZ2 147 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 KDM4EB2RXH2 506 aaPredicted RBP13.37□□□□□ -0.27
LIPA-202ENST00000336233 CTDSP2O14595 271 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 RNGTTO60942 597 aaKnown RBP13.37□□□□□ -0.27
LIPA-202ENST00000336233 CYP7B1O75881 506 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 DLGAP3O95886 979 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 CA3P07451 260 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 HOXC4P09017 264 aaPredicted RBP13.37□□□□□ -0.27
LIPA-202ENST00000336233 TNFSF8P32971 234 aa13.37□□□□□ -0.27
LIPA-202ENST00000336233 TNFRSF4P43489 277 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms