RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 INHAP05111 366 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LAG3P18627 525 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GCGRP47871 477 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SSBP1Q04837 148 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM35AQ53FP2 167 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MLIPQ5VWP3 458 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 CORO6Q6QEF8 472 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 KIAA1324Q6UXG2 1013 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SERINC5Q86VE9 423 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 VGLL2Q8N8G2 317 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 JOSD2Q8TAC2 188 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SIX2Q9NPC8 291 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 VNN3Q9NY84 501 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SPATA31A5Q5VU36 1347 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SPATA31A7Q8IWB4 1347 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 TCRBV3S1A0A5B6 114 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SLC22A23A1A5C7 686 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 KCNJ13O60928 360 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 PNPP00491 289 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ALDOBP05062 364 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 PRPH2P23942 346 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 NR0B1P51843 470 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 INAVAQ3KP66 663 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 PLA2G15Q8NCC3 412 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GAB3Q8WWW8 586 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 B3GNT5Q9BYG0 378 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ACP6Q9NPH0 428 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 B4GALT5O43286 388 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MED6O75586 246 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 CDK14O94921 469 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ITPK1Q13572 414 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 FAM182AQ5T1J6 154 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 NDUFAF7Q7L592 441 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 NAA40Q86UY6 237 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SULF2Q8IWU5 870 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LRRC46Q96FV0 321 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 EXOSC3Q9NQT5 275 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 PLCXD1Q9NUJ7 323 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 FBXL3Q9UKT7 428 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 KIF13AQ9H1H9 1805 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MYH15Q9Y2K3 1946 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MANSC4A6NHS7 340 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GIPP09681 153 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 H2BFMP0C1H6 154 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ZP3P21754 424 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 WEE1P30291 646 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 RPS19P39019 145 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 TNFSF9P41273 254 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF157P51786 506 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 HCCSP53701 268 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 CASP9P55211 416 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 POU6F2P78424 691 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LRP8Q14114 963 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GINS1Q14691 196 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LRRC56Q8IYG6 542 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ATG10Q9H0Y0 220 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 RPS10-NUDT3A0A1W2PQS6 291 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM200CA6NKL6 621 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 FANCGO15287 622 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 BCAS1O75363 584 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 HLA-AP01891 365 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 CREB1P16220 341 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 PBX2P40425 430 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 RPS10P46783 165 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 BAMBIQ13145 260 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 C3orf38Q5JPI3 329 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SIRPB2Q5JXA9 342 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 OR2A12Q8NGT7 310 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 NANOS1Q8WY41 292 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LRR1Q96L50 414 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF681Q96N22 645 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SAP130Q9H0E3 1048 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 IL36AQ9UHA7 158 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 EDDM13A0A1B0GTR0 161 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ARGFXA6NJG6 315 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 EEF1E1-BLOC1S5C9J1V9 151 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF623O75123 536 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TFPTP0C1Z6 253 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 CD9P21926 228 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 UBE2KP61086 200 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ACTR1AP61163 376 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 FIGNL1Q6PIW4 674 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 LRRTM4Q86VH4 590 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 CMASQ8NFW8 434 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 SPTSSAQ969W0 71 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 P2RY13Q9BPV8 354 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 MICU1Q9BPX6 476 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 CERS4Q9HA82 394 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 DDX4Q9NQI0 724 aaKnown RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 TXNL4BQ9NX01 149 aaKnown RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ZFP37Q9Y6Q3 630 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 A8MV72 311 aaPredicted RBP5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ARHGAP33O14559 1287 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 MBP02144 154 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 GJB1P08034 283 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 MTNR1BP49286 362 aa5.26□□□□□ -1.57
PTPRB-202ENST00000334414 ERVK-16P61578 105 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms