RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 HLA-DQB1P01920 261 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 FAM157BP0CG42 384 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 RPL3P39023 403 aaKnown RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 KCNC3Q14003 757 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 IL20RBQ6UXL0 311 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF783Q6ZMS7 281 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 CXorf36Q9H7Y0 433 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 ENAMQ9NRM1 1142 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 PHF11Q9UIL8 331 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 ANHXE9PGG2 379 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 EEF1E1O43324 174 aaKnown RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 SERPINI2O75830 405 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 RAF1P04049 648 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 ANXA3P12429 323 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 ELK1P19419 428 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 DDCP20711 480 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 XPAP23025 273 aaPredicted RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 HAAOP46952 286 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 SMSP52788 366 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 HIST2H2AA3Q6FI13 130 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 KIAA1161Q6NSJ0 714 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 KIF18BQ86Y91 864 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 OR2AP1Q8NGE2 309 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 XAGE5Q8WWM1 108 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 FOPNLQ96NB1 174 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 SMAD5Q99717 465 aaKnown RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 USB1Q9BQ65 265 aaKnown RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 WFDC6Q9BQY6 131 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 THAP7Q9BT49 309 aaPredicted RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 ZSCAN32Q9NX65 697 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 TESQ9UGI8 421 aaKnown RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 ELF5Q9UKW6 265 aaPredicted RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 SF3B6Q9Y3B4 125 aaKnown RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 OR51B4Q9Y5P0 310 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 CHD5Q8TDI0 1954 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 LINC00862A6NCI5 91 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 SRPRAP08240 638 aaKnown RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 MMP11P24347 488 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 OPRD1P41143 372 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 CNTN1Q12860 1018 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 NTRK2Q16620 822 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF791Q3KP31 576 aaPredicted RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 RAET1GQ6H3X3 334 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF600Q6ZNG1 722 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 RFT1Q96AA3 541 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 SLC22A12Q96S37 553 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 SMG9Q9H0W8 520 aaKnown RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 BRD7Q9NPI1 651 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 TRPC4Q9UBN4 977 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 FBXW2Q9UKT8 454 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 CLEC4AQ9UMR7 237 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 MRPS7Q9Y2R9 242 aaKnown RBP12.96□□□□□ -0.33
SYNE3-201ENST00000334258 WDR87Q6ZQQ6 2873 aa12.96□□□□□ -0.33
SYNE3-201ENST00000334258 TOXO94900 526 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 SOD1P00441 154 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 ACP2P11117 423 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 UQCRC2P22695 453 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 RAB40BQ12829 278 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 RNLSQ5VYX0 342 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 LURAP1LQ8IV03 231 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 GHDCQ8N2G8 530 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 OR4F15Q8NGB8 312 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 TEX47Q8TBZ9 253 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 SLC22A8Q8TCC7 542 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 POF1BQ8WVV4 589 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 ZNF607Q96SK3 696 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 TRAF4Q9BUZ4 470 aaPredicted RBP12.96□□□□□ -0.34
SYNE3-201ENST00000334258 SPNS1Q9H2V7 528 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 CDCP1Q9H5V8 836 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 EGLN3Q9H6Z9 239 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 B4GALT6Q9UBX8 382 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 NDOR1Q9UHB4 597 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 ZFR2Q9UPR6 939 aaKnown RBP12.96□□□□□ -0.34
SYNE3-201ENST00000334258 SLC9A8Q9Y2E8 581 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.34
SYNE3-201ENST00000334258 TRDV1A0A1B0GX56 115 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SGK494L7N484 410 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 GABRPO00591 440 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 PRODHO43272 600 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 LANCL1O43813 399 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 LALBAP00709 142 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 IFNA7P01567 189 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SYPP08247 313 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SYN1P17600 705 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SDHBP21912 280 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 IMPA1P29218 277 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SOX9P48436 509 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SPINT3P49223 89 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 CENPAP49450 140 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 MLLT1Q03111 559 aaPredicted RBP12.95□□□□□ -0.34
SYNE3-201ENST00000334258 MAP4K2Q12851 820 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 PRSS53Q2L4Q9 553 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 OR4D11Q8NGI4 311 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 UCN3Q969E3 161 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 PDXPQ96GD0 296 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 KCNJ15Q99712 375 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 SUV39H2Q9H5I1 410 aa12.95□□□□□ -0.34
SYNE3-201ENST00000334258 NT5DC2Q9H857 520 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms