RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SAMD14Q8IZD0 417 aaPredicted RBP21■□□□□ 0.95
PNKP-201ENST00000322344 CLIP4Q8N3C7 705 aa21■□□□□ 0.95
PNKP-201ENST00000322344 OR9A2Q8NGT5 310 aa21■□□□□ 0.95
PNKP-201ENST00000322344 NT5CQ8TCD5 201 aa21■□□□□ 0.95
PNKP-201ENST00000322344 PIK3R3Q92569 461 aa21■□□□□ 0.95
PNKP-201ENST00000322344 SLC22A18Q96BI1 424 aa21■□□□□ 0.95
PNKP-201ENST00000322344 NDUFB11Q9NX14 153 aa21■□□□□ 0.95
PNKP-201ENST00000322344 KLHL3Q9UH77 587 aa21■□□□□ 0.95
PNKP-201ENST00000322344 KCNE3Q9Y6H6 103 aa21■□□□□ 0.95
PNKP-201ENST00000322344 DUXAA6NLW8 204 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 CYP7B1O75881 506 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 PTTG1O95997 202 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 EN2P19622 333 aaPredicted RBP20.99■□□□□ 0.95
PNKP-201ENST00000322344 DOC2BQ14184 412 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 SYCE2Q6PIF2 218 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 MRGPREQ86SM8 312 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 ASPGQ86U10 573 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 TEX47Q8TBZ9 253 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 FGF11Q92914 225 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 FGF14Q92915 247 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 ZNF582Q96NG8 517 aaPredicted RBP20.99■□□□□ 0.95
PNKP-201ENST00000322344 ASPNQ9BXN1 380 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 PRRG3Q9BZD7 231 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 POLR2J2Q9GZM3 115 aaKnown RBP20.99■□□□□ 0.95
PNKP-201ENST00000322344 EXOSC4Q9NPD3 245 aaKnown RBP20.99■□□□□ 0.95
PNKP-201ENST00000322344 POLE4Q9NR33 117 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 MRPS18AQ9NVS2 196 aaKnown RBP20.99■□□□□ 0.95
PNKP-201ENST00000322344 KLHL28Q9NXS3 571 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 TESQ9UGI8 421 aaKnown RBP20.99■□□□□ 0.95
PNKP-201ENST00000322344 KLF15Q9UIH9 416 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 SCML1Q9UN30 329 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 YBX2Q9Y2T7 364 aaKnown RBP20.99■□□□□ 0.95
PNKP-201ENST00000322344 GSAPA4D1B5 854 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 SLC31A1O15431 190 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 ADAM23O75077 832 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 AGR2O95994 175 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 PRKAR1BP31321 381 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 CHRNEQ04844 493 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 ST3GAL3Q11203 375 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 TSPAN31Q12999 210 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 CBX3Q13185 183 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 SNAPC1Q16533 368 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 TMEM196Q5HYL7 178 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 ACSM5Q6NUN0 579 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 TMEM184AQ6ZMB5 413 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 C16orf62Q7Z3J2 963 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 CCDC190Q86UF4 302 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 OR4E2Q8NGC2 313 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 OR52I1Q8NGK6 324 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 LRR1Q96L50 414 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 GPA33Q99795 319 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 CNPPD1Q9BV87 410 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 SYNPO2LQ9H987 977 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D29Q9UFV1 150 aa20.99■□□□□ 0.95
PNKP-201ENST00000322344 MN1Q10571 1320 aaPredicted RBP20.98■□□□□ 0.95
PNKP-201ENST00000322344 A0A087WUU8 490 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 SOX3P41225 446 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 ANKRD54Q6NXT1 300 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 SLC27A4Q6P1M0 643 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 VN1R4Q7Z5H5 301 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 HMGN2P46Q86SG4 172 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 POC5Q8NA72 575 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 TMEM163Q8TC26 289 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 NTMQ9P121 344 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 PHF11Q9UIL8 331 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 PCDHGB6Q9Y5F9 930 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 CHD7Q9P2D1 2997 aa20.98■□□□□ 0.95
PNKP-201ENST00000322344 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 A0A1W2PS29 197 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 HYKKA2RU49 373 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 FAM170BA6NMN3 283 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 HBQ1P09105 142 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 LAMP2P13473 410 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 CRYBB2P43320 205 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 C3orf38Q5JPI3 329 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 SLC36A4Q6YBV0 504 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 BCDIN3DQ7Z5W3 292 aaKnown RBP20.97■□□□□ 0.95
PNKP-201ENST00000322344 FLCNQ8NFG4 579 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 GIMAP5Q96F15 307 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 CEP19Q96LK0 163 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 EQTNQ9NQ60 294 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 QPCTLQ9NXS2 382 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 SSR3Q9UNL2 185 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 ZNF670-ZNF695F2Z2N8 137 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 ZSCAN9O15535 394 aaPredicted RBP20.97■□□□□ 0.95
PNKP-201ENST00000322344 TNFRSF17Q02223 184 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 SFSWAPQ12872 951 aaKnown RBP20.97■□□□□ 0.95
PNKP-201ENST00000322344 ATAT1Q5SQI0 421 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 RASSF6Q6ZTQ3 369 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 KIF18BQ86Y91 864 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 ADAMTS15Q8TE58 950 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 JPH3Q8WXH2 748 aaPredicted RBP20.97■□□□□ 0.95
PNKP-201ENST00000322344 DIO2Q92813 273 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 C10orf90Q96M02 699 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 SLC38A2Q96QD8 506 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 CCDC32Q9BV29 185 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 QRSL1Q9H0R6 528 aaKnown RBP20.97■□□□□ 0.95
PNKP-201ENST00000322344 SLC6A17Q9H1V8 727 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 FGF20Q9NP95 211 aaPredicted RBP20.97■□□□□ 0.95
PNKP-201ENST00000322344 CTPS2Q9NRF8 586 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms