RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CDH11P55287 796 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 TRAM2Q15035 370 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 SMUG1Q53HV7 270 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 Q5BKY6 102 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 TMEM64Q6YI46 380 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 SZRD1Q7Z422 152 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 MARCH9Q86YJ5 346 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 CADM2Q8N3J6 435 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 SYT14Q8NB59 555 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 TMEM145Q8NBT3 493 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 NLGN4YQ8NFZ3 816 aaPredicted RBP13.04□□□□□ -0.32
MKS1-201ENST00000313863 NUS1Q96E22 293 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 KCNJ15Q99712 375 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
MKS1-201ENST00000313863 FOLH1BQ9HBA9 442 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 FAM170BA6NMN3 283 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 TGM5O43548 720 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 B4GALT2O60909 372 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 OR2B3O76000 313 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 SYN1P17600 705 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 ATP12AP54707 1039 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 TAS2R41P59536 307 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 REEP5Q00765 189 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 RAET1GQ6H3X3 334 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 FAM180BQ6P0A1 224 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 PARS2Q7L3T8 475 aaKnown RBP13.04□□□□□ -0.32
MKS1-201ENST00000313863 UBE2J2Q8N2K1 259 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 NEIL3Q8TAT5 605 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 PIGXQ8TBF5 258 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 CYB5D2Q8WUJ1 264 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 OTUB1Q96FW1 271 aaPredicted RBP13.04□□□□□ -0.32
MKS1-201ENST00000313863 HYLS1Q96M11 299 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 KCNN2Q9H2S1 579 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 SERHL2Q9H4I8 314 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 ZCCHC3Q9NUD5 404 aaKnown RBP13.04□□□□□ -0.32
MKS1-201ENST00000313863 NLKQ9UBE8 527 aa13.04□□□□□ -0.32
MKS1-201ENST00000313863 INMT-MINDY4F8WBC2 141 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 RTCAO00442 366 aaKnown RBP13.03□□□□□ -0.32
MKS1-201ENST00000313863 PRNPP04156 253 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 FAM157BP0CG42 384 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ERGP11308 486 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 PKLRP30613 574 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 BUD31P41223 144 aaPredicted RBP13.03□□□□□ -0.32
MKS1-201ENST00000313863 STAT5AP42229 794 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 SLC6A11P48066 632 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 P2RX3P56373 397 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 BDH1Q02338 343 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 RIPPLY1Q0D2K3 151 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 BTBD16Q32M84 506 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 HACD4Q5VWC8 232 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 SIGIRRQ6IA17 410 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 PAMR1Q6UXH9 720 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 DEFB128Q7Z7B8 93 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 KIF18BQ86Y91 864 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ARIH2OSQ8N7S6 290 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ZNF485Q8NCK3 441 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 OR6T1Q8NGN1 323 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 SNAPC3Q92966 411 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 JAM3Q9BX67 310 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 DDX31Q9H8H2 851 aaKnown RBP13.03□□□□□ -0.32
MKS1-201ENST00000313863 WDR70Q9NW82 654 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 GABRPO00591 440 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 C8AP07357 584 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ARSBP15848 533 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 CA8P35219 290 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 PPM1AP35813 382 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 NUDT1P36639 197 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 TALDO1P37837 337 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 CCL23P55773 120 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ST8SIA6P61647 398 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ABATP80404 500 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ST3GAL3Q11203 375 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 FAM46CQ5VWP2 391 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
MKS1-201ENST00000313863 LMNTD1Q8N9Z9 388 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 VN1R2Q8NFZ6 395 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 OR56A1Q8NGH5 318 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 AMDHD1Q96NU7 426 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 IL17FQ96PD4 163 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 BBS4Q96RK4 519 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 WFDC6Q9BQY6 131 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 ABCG4Q9H172 646 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 OR52A5Q9H2C5 316 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 EGLN3Q9H6Z9 239 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 CALML5Q9NZT1 146 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 TAC3Q9UHF0 121 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 CCL26Q9Y258 94 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 EXOGQ9Y2C4 368 aaKnown RBP13.03□□□□□ -0.32
MKS1-201ENST00000313863 CLCA3PQ9Y6N3 262 aa13.03□□□□□ -0.32
MKS1-201ENST00000313863 PRAMEF27A3QJZ7 478 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 SMIM30A4D0T7 59 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 ERVH48-1M5A8F1 160 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 KPNA3O00505 521 aaPredicted RBP13.02□□□□□ -0.33
MKS1-201ENST00000313863 HMGN1P05114 100 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 DPTQ07507 201 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 NFE2L1Q14494 772 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 TMEM215Q68D42 235 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 FAM109AQ8N4B1 249 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms