RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 MOAP1Q96BY2 351 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SNRNP40Q96DI7 357 aaKnown RBP10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 THOC1Q96FV9 657 aaKnown RBP10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CHMP6Q96FZ7 201 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 VSTM2LQ96N03 204 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 RILPQ96NA2 401 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 BTBD9Q96Q07 612 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CCDC28BQ9BUN5 200 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CLMPQ9H6B4 373 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 Q9N2J8 555 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 FAM120CQ9NX05 1096 aaKnown RBP10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ZIM2Q9NZV7 527 aa10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 MRTO4Q9UKD2 239 aaKnown RBP10.15□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SPTA1P02549 2419 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 A0A0G2JND7 137 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ACOT7O00154 380 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ABCB7O75027 752 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PPM1BO75688 479 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLC22A3O75751 556 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 KRT16P08779 473 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 DRD5P21918 477 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SOX18P35713 384 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 MDH1P40925 334 aaKnown RBP10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 IDH3AP50213 366 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 MEOX1P50221 254 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PSMD4P55036 377 aaKnown RBP10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GPR85P60893 370 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 IRX1P78414 480 aaPredicted RBP10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 MRPS22P82650 360 aaKnown RBP10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PMP22Q01453 160 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PLGLB1Q02325 96 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 LRRC74AQ0VAA2 488 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TP53BP2Q13625 1128 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ZNF791Q3KP31 576 aaPredicted RBP10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SPANXN4Q5MJ08 99 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLC22A10Q63ZE4 541 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TMEM64Q6YI46 380 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 MDGA2Q7Z553 956 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLC44A2Q8IWA5 706 aaPredicted RBP10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLC34A3Q8N130 599 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CDRT4Q8N9R6 151 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 POGLUT1Q8NBL1 392 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 OR10G3Q8NGC4 313 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 OR5M3Q8NGP4 307 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 DNAJB8Q8NHS0 232 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SFXN5Q8TD22 340 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GRHL3Q8TE85 626 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 STON2Q8WXE9 905 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 OMA1Q96E52 524 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 EBF4Q9BQW3 602 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CCDC134Q9H6E4 229 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 OLAHQ9NV23 265 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 FGFR1OP2Q9NVK5 253 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ASF1BQ9NVP2 202 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CNIH4Q9P003 139 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 DCTN4Q9UJW0 460 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 VPS4AQ9UN37 437 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TRIM33Q9UPN9 1127 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GPR45Q9Y5Y3 372 aa10.14□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TLN1Q9Y490 2541 aaKnown RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ZGRF1Q86YA3 2104 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SVILO95425 2214 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 RNF103-CHMP3A0A140T963 221 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TFECO14948 347 aaPredicted RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ANKRD28O15084 1053 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TO15178 435 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PEX1O43933 1283 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 HS6ST1O60243 411 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ZNF354AO60765 605 aaPredicted RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 REM1O75628 298 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 KCNH1O95259 989 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PSMG1O95456 288 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CPSF4O95639 269 aaKnown RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 IL6P05231 212 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PGRP06401 933 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CCL3P10147 92 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PLA2G2AP14555 144 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ZNF24P17028 368 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 NAGAP17050 411 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CCT3P49368 545 aaKnown RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CORO7P57737 925 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 FBXW4P57775 412 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 KCNJ2P63252 427 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 HBA1P69905 142 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ALDH6A1Q02252 535 aaKnown RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 EFR3AQ14156 821 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ELOAQ14241 798 aaKnown RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TBCELQ5QJ74 424 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PRAMEF20Q5VT98 475 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ZCCHC12Q6PEW1 402 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 LYPD8Q6UX82 237 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ANKRD46Q86W74 232 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ZNF227Q86WZ6 799 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SULF2Q8IWU5 870 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CLECL1Q8IZS7 167 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 FBXW8Q8N3Y1 598 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CPSF7Q8N684 471 aaKnown RBP10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TRIML2Q8N7C3 387 aa10.13□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PAQR8Q8TEZ7 354 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms