RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 LYPLAL1Q5VWZ2 237 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 FAHD1Q6P587 224 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 GAREM2Q75VX8 874 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 C10orf53Q8N6V4 93 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 ZNF431Q8TF32 576 aaPredicted RBP13.77□□□□□ -0.21
PTPN9-201ENST00000306726 CAPN5O15484 640 aaPredicted RBP13.77□□□□□ -0.21
PTPN9-201ENST00000306726 ERI3O43414 337 aaKnown RBP13.77□□□□□ -0.21
PTPN9-201ENST00000306726 PRG2P13727 222 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 ARHGDIBP52566 201 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 AP1S2P56377 157 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 PUM1Q14671 1186 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPN9-201ENST00000306726 RNF44Q7L0R7 432 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 TMEM145Q8NBT3 493 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 OR52N2Q8NGI0 321 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 OR6T1Q8NGN1 323 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 EFHD2Q96C19 240 aaPredicted RBP13.77□□□□□ -0.21
PTPN9-201ENST00000306726 PLA2G12AQ9BZM1 189 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 BTNL2Q9UIR0 455 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 CORO2BQ9UQ03 480 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 A0A0G2JMP0 313 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 A0A0X1KG70 313 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 B4DXG7 233 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 SCN2BO60939 215 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 GKN3PP0CG01 181 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 EVI2BP34910 448 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 HCCSP53701 268 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 PRAMEF14Q5SWL7 426 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 PRAMEF13Q5VWM6 474 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 PLBD1Q6P4A8 553 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 OR4M2Q8NGB6 313 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 SLC5A11Q8WWX8 675 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 TM9SF4Q92544 642 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 SLC35G5Q96KT7 338 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 MAPKAP1Q9BPZ7 522 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 GPR174Q9BXC1 333 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 TDP1Q9NUW8 608 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 MGAT4AQ9UM21 535 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 HCFC2Q9Y5Z7 792 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 HIDE1A8MVS5 230 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 FABP7O15540 132 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 LYRM1O43325 122 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 LATS1O95835 1130 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 PCGF2P35227 344 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 MAGEA2P43356 314 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 PRSS53Q2L4Q9 553 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 SPIN4Q56A73 249 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 KHDRBS2Q5VWX1 349 aaKnown RBP13.76□□□□□ -0.21
PTPN9-201ENST00000306726 FAIM2Q9BWQ8 316 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 RBCK1Q9BYM8 510 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 CERS4Q9HA82 394 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 HSPE1-MOB4S4R3N1 261 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 H0YC42 278 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 PIP5K1CO60331 668 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 OSMP13725 252 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 RAE1P78406 368 aaKnown RBP13.76□□□□□ -0.21
PTPN9-201ENST00000306726 VEZF1Q14119 521 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 SAXO2Q658L1 398 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 PRSS45Q7RTY3 260 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 TSEN54Q7Z6J9 526 aaKnown RBP13.76□□□□□ -0.21
PTPN9-201ENST00000306726 VRK2Q86Y07 508 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 VWA5B2Q8N398 1253 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 OR7G1Q8NGA0 311 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 TFGQ92734 400 aaPredicted RBP13.76□□□□□ -0.21
PTPN9-201ENST00000306726 MAP6Q96JE9 813 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 SLC38A2Q96QD8 506 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 DCLRE1CQ96SD1 692 aaKnown RBP13.76□□□□□ -0.21
PTPN9-201ENST00000306726 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
PTPN9-201ENST00000306726 TREX2Q9BQ50 279 aaPredicted RBP13.76□□□□□ -0.21
PTPN9-201ENST00000306726 OR1A2Q9Y585 309 aa13.76□□□□□ -0.21
PTPN9-201ENST00000306726 ARHGEF15O94989 841 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 RHCEP18577 417 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 GALK2Q01415 458 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 FADDQ13158 208 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 TEAD2Q15562 447 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 ZNF79Q15937 498 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 WDR45BQ5MNZ6 344 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 ANKRD54Q6NXT1 300 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 OR13C5Q8NGS8 318 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 GLYATL1Q969I3 302 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 DDX31Q9H8H2 851 aaKnown RBP13.75□□□□□ -0.21
PTPN9-201ENST00000306726 MAU2Q9Y6X3 613 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 CABIN1Q9Y6J0 2220 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 TBC1D3BA6NDS4 549 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 OR52A4PA6NMU1 304 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 SOCS6O14544 535 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 C1GALT1C1LP0DN25 315 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 PTHLHP12272 177 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 NAA10P41227 235 aaPredicted RBP13.75□□□□□ -0.21
PTPN9-201ENST00000306726 CCR6P51684 374 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 MTAPQ13126 283 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 FCN2Q15485 313 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 ZNF311Q5JNZ3 666 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 LIPJQ5W064 366 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
PTPN9-201ENST00000306726 TCTN3Q6NUS6 607 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 ZNF613Q6PF04 617 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 CPOQ8IVL8 374 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 SDHCQ99643 169 aaPredicted RBP13.75□□□□□ -0.21
PTPN9-201ENST00000306726 SZT2Q5T011 3432 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms