RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 KIF18BQ86Y91 864 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 LAX1Q8IWV1 398 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 NATD1Q8N6N6 113 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 NANOGP1Q8N7R0 232 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 OR52E1Q8NGJ3 308 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 OR52I1Q8NGK6 324 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 MS4A6EQ96DS6 147 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 ST6GAL2Q96JF0 529 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 NEDD4LQ96PU5 975 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SMURF1Q9HCE7 757 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 TAS2R7Q9NYW3 318 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 CNIH4Q9P003 139 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SLC9A8Q9Y2E8 581 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 NTNG1Q9Y2I2 539 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SCN2AQ99250 2005 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 MUC22E2RYF6 1773 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-204ENST00000300862 TNFRSF10AO00220 468 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 AIFM1O95831 613 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 CLEC2LP0C7M8 214 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 HIST1H1TP22492 207 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-204ENST00000300862 SEC13P55735 322 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 SMIM11AP58511 58 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 LTB4RQ15722 352 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 C2orf27AQ580R0 203 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 TOR1AIP1Q5JTV8 583 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 FAM209AQ5JX71 171 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 VITQ6UXI7 678 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 NRARPQ7Z6K4 114 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 VRK2Q86Y07 508 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 PHC2Q8IXK0 858 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 MORN4Q8NDC4 146 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 DOK4Q8TEW6 326 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 RASSF5Q8WWW0 418 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 KAT2AQ92830 837 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 ZNF582Q96NG8 517 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-204ENST00000300862 OR2A14Q96R47 310 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 FAIM2Q9BWQ8 316 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 MND1Q9BWT6 205 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 C6orf106Q9H6K1 298 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-204ENST00000300862 PRDM7Q9NQW5 492 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 DDX28Q9NUL7 540 aaKnown RBP12.13□□□□□ -0.47
HIF3A-204ENST00000300862 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 MUTYHQ9UIF7 546 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 MKLN1Q9UL63 735 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 ACSL5Q9ULC5 683 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 ASB4Q9Y574 426 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 CPSF4LA6NMK7 179 aaKnown RBP12.13□□□□□ -0.47
HIF3A-204ENST00000300862 NOTOA8MTQ0 251 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 CENPBD1B2RD01 187 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 LGI1O95970 557 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 APOA1P02647 267 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 DRD2P14416 443 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 PRKCAP17252 672 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 MC3RP41968 323 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 MAN2A2P49641 1150 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 KHKP50053 298 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 CHRNEQ04844 493 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 GPR50Q13585 617 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 CDK10Q15131 360 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 MEDAGQ5VYS4 303 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 FAM109BQ6ICB4 259 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-204ENST00000300862 RAB42Q8N4Z0 105 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 OR9Q1Q8NGQ5 310 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 OR9A2Q8NGT5 310 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 DMRTB1Q96MA1 342 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 PLA2G2FQ9BZM2 168 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 NT5DC2Q9H857 520 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 PLSCR3Q9NRY6 295 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 ADAM29Q9UKF5 820 aa12.13□□□□□ -0.47
HIF3A-204ENST00000300862 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-204ENST00000300862 A0A087WUU8 490 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 CH25HO95992 272 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 ATP5A1P25705 553 aaKnown RBP12.12□□□□□ -0.47
HIF3A-204ENST00000300862 DBPQ10586 325 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-204ENST00000300862 ZFP69Q49AA0 526 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 C22orf42Q6IC83 251 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 ABHD17CQ6PCB6 329 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 FAM92BQ6ZTR7 304 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 PRICKLE2Q7Z3G6 844 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 ZFP41Q8N8Y5 198 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 IL20RAQ9UHF4 553 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 TRBV23OR9-2A0A075B6M9 112 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 CDRT1O95170 752 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 CEACAM5P06731 702 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 DDX5P17844 614 aaKnown RBP12.12□□□□□ -0.47
HIF3A-204ENST00000300862 FCARP24071 287 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 PEBP1P30086 187 aaKnown RBP12.12□□□□□ -0.47
HIF3A-204ENST00000300862 PKLRP30613 574 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 TRIM23P36406 574 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 CD79BP40259 229 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 AVPR1BP47901 424 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 TAS2R41P59536 307 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 MRPS15P82914 257 aaKnown RBP12.12□□□□□ -0.47
HIF3A-204ENST00000300862 RUNX3Q13761 415 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 LRRC32Q14392 662 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 MLC1Q15049 377 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 OCLNQ16625 522 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 FAM26EQ8N5C1 309 aa12.12□□□□□ -0.47
HIF3A-204ENST00000300862 SIMC1Q8NDZ2 872 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms