RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ADAP00813 363 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 NPPBP16860 134 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 NRIP1P48552 1158 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 DGLUCYQ7Z3D6 616 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 CBARPQ8N350 705 aaPredicted RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 OR6T1Q8NGN1 323 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 WDR20Q8TBZ3 569 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 TTYH1Q9H313 450 aaPredicted RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 PCDHGA2Q9Y5H1 932 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 SCN3AQ9NY46 2000 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 MYOFQ9NZM1 2061 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 GRXCR2A6NFK2 248 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 RNASET2O00584 256 aaKnown RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 YY2O15391 372 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 IFNGP01579 166 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 HIST1H2ABP04908 130 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 CHRNEQ04844 493 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 CBLBQ13191 982 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 ADAM15Q13444 863 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 METTL2BQ6P1Q9 378 aaKnown RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 HIST3H2AQ7L7L0 130 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 ZNF438Q7Z4V0 828 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 TAF8Q7Z7C8 310 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 SYT9Q86SS6 491 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 OR8J2Q8NGG1 315 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 OR8S1Q8NH09 359 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 ADAMTS16Q8TE57 1224 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 ZNF296Q8WUU4 475 aaPredicted RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 DEDD2Q8WXF8 326 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 OVCA2Q8WZ82 227 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 HIST1H2ACQ93077 130 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 OR4K3Q96R72 315 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 CDADC1Q9BWV3 514 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 TTLL2Q9BWV7 592 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 MTIF3Q9H2K0 278 aaKnown RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 B3GNT3Q9Y2A9 372 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 CLDN24A6NM45 220 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 RFXAPO00287 272 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 MAGEB4O15481 346 aaPredicted RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 PRKYO43930 277 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 PAHP00439 452 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 F11P03951 625 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 ZNF10P21506 573 aaPredicted RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 AK4P27144 223 aaPredicted RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 GDI1P31150 447 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 FCHO2Q0JRZ9 810 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 LTB4RQ15722 352 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 LRRC37A5PQ49AS3 106 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 HLA-DQA1Q5Y7H0 255 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 ERN2Q76MJ5 926 aaKnown RBP12.58□□□□□ -0.4
CASC4-201ENST00000299957 FAM220AQ7Z4H9 259 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 L3MBTL4Q8NA19 623 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 POMGNT2Q8NAT1 580 aa12.58□□□□□ -0.4
CASC4-201ENST00000299957 FXYD6-FXYD2A0A087WZ82 144 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 KLK8O60259 260 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 TSPAN9O75954 239 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 IGLV3-27P01718 113 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 APEHP13798 732 aaKnown RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 FNTBP49356 437 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 TMED4Q7Z7H5 227 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 OR52E4Q8NGH9 312 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 TSEN15Q8WW01 171 aaKnown RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 SPRYD4Q8WW59 207 aaPredicted RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 ZMYND19Q96E35 227 aaPredicted RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 FXYD6Q9H0Q3 95 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 C11orf54Q9H0W9 315 aaPredicted RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 RNF121Q9H920 327 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 ELL3Q9HB65 397 aaPredicted RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 SH2B3Q9UQQ2 575 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 LTBP4Q8N2S1 1624 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 LDB3O75112 727 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 CD160O95971 181 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 ACVR2AP27037 513 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 GABRA3P34903 492 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 WNT4P56705 351 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 STXBP1P61764 594 aaKnown RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 GFOD2Q3B7J2 385 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 OAFQ86UD1 273 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 ALDH16A1Q8IZ83 802 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 YIPF7Q8N8F6 280 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 SRFBP1Q8NEF9 429 aaKnown RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 GRPEL2Q8TAA5 225 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 TSACCQ96A04 125 aaPredicted RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 ITPKCQ96DU7 683 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 ERMAPQ96PL5 475 aaPredicted RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 NDC1Q9BTX1 674 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 RDH8Q9NYR8 311 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 AK6Q9Y3D8 172 aaKnown RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 FKBP7Q9Y680 259 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 ANTXRLA6NF34 631 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 SLC16A5O15375 505 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 FMO6PO60774 539 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 FURINP09958 794 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 HSD3B1P14060 373 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 HK1P19367 917 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 HSD3B2P26439 372 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 KCNC3Q14003 757 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms