RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 HPF1Q9NWY4 346 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 BCAP29Q9UHQ4 241 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 ENTPD4Q9Y227 616 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 WBP11Q9Y2W2 641 aaKnown RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 PCDHGB6Q9Y5F9 930 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 GCN1Q92616 2671 aaKnown RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 OR6C76A6NM76 312 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 TFAP2AP05549 437 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 DDCP20711 480 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 GNLYP22749 145 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 PTGER1P34995 402 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SOX3P41225 446 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 HSPA13P48723 471 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SLC37A1P57057 533 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 RPL38P63173 70 aaKnown RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SRSF11Q05519 484 aaKnown RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 MAP4K2Q12851 820 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 ELOAQ14241 798 aaKnown RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 INAQ16352 499 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 MMEL1Q495T6 779 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 RFTN2Q52LD8 501 aaPredicted RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 PIGGQ5H8A4 983 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 FAM71E1Q6IPT2 247 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 DHRS4L2Q6PKH6 230 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 TICAM1Q8IUC6 712 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 FAM98AQ8NCA5 519 aaKnown RBP11.19□□□□□ -0.62
HMGB2-201ENST00000296503 ICA1LQ8NDH6 482 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 NUBPLQ8TB37 319 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 SCMH1Q96GD3 660 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 PPP3R2Q96LZ3 170 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 ZNF681Q96N22 645 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 TAAR6Q96RI8 345 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 OR10A5Q9H207 317 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 CLMPQ9H6B4 373 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 MYNNQ9NPC7 610 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 OLAHQ9NV23 265 aa11.19□□□□□ -0.62
HMGB2-201ENST00000296503 C2orf92A0A1B0GVN3 265 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 ATP6AP2A0A1C7CYW4 349 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 NPIPB8E9PQR5 432 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 H0YJX3 145 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 LSM1O15116 133 aaKnown RBP11.18□□□□□ -0.62
HMGB2-201ENST00000296503 ATP6AP2O75787 350 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 OR6B1O95007 311 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 BAG2O95816 211 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 CRYABP02511 175 aaKnown RBP11.18□□□□□ -0.62
HMGB2-201ENST00000296503 ATP1B1P05026 303 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 MPIP34949 423 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 PMP22Q01453 160 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 DUSP2Q05923 314 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 FUT7Q11130 342 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 MPEG1Q2M385 716 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 PRICKLE4Q2TBC4 344 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 CES4AQ5XG92 561 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 OPN5Q6U736 354 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.18□□□□□ -0.62
HMGB2-201ENST00000296503 ZNF554Q86TJ5 538 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 ZNF227Q86WZ6 799 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 VWA5B2Q8N398 1253 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 ZNF781Q8N8C0 355 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 OR7G1Q8NGA0 311 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 DNAJB8Q8NHS0 232 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 SLC22A8Q8TCC7 542 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 EGLN2Q96KS0 407 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 CCT7Q99832 543 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 WWTR1Q9GZV5 400 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 EHD3Q9NZN3 535 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 CNOT11Q9UKZ1 510 aaKnown RBP11.18□□□□□ -0.62
HMGB2-201ENST00000296503 TMED5Q9Y3A6 229 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 RAP2CQ9Y3L5 183 aa11.18□□□□□ -0.62
HMGB2-201ENST00000296503 SHANK1Q9Y566 2161 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 AKAP10O43572 662 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 TNFAIP8O95379 198 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 CLPTM1O96005 669 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 TACR1P25103 407 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 UQCRFS1P47985 274 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 RPL14P50914 215 aaKnown RBP11.17□□□□□ -0.62
HMGB2-201ENST00000296503 MGAT2Q10469 447 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 MRPL49Q13405 166 aaKnown RBP11.17□□□□□ -0.62
HMGB2-201ENST00000296503 EXOSC7Q15024 291 aaKnown RBP11.17□□□□□ -0.62
HMGB2-201ENST00000296503 LTB4RQ15722 352 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 EIF2S3LQ2VIR3 472 aaKnown RBP11.17□□□□□ -0.62
HMGB2-201ENST00000296503 ATP6AP1LQ52LC2 224 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 TRMT12Q53H54 448 aaKnown RBP11.17□□□□□ -0.62
HMGB2-201ENST00000296503 MDGA2Q7Z553 956 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 SATL1Q86VE3 508 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 GPALPP1Q8IXQ4 340 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 ZNF615Q8N8J6 731 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 ZBTB8BQ8NAP8 495 aaPredicted RBP11.17□□□□□ -0.62
HMGB2-201ENST00000296503 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.17□□□□□ -0.621e-323■■□□□ 14.2
HMGB2-201ENST00000296503 STON2Q8WXE9 905 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 TUBGCP3Q96CW5 907 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 PPP1R36Q96LQ0 422 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 C3orf30Q96M34 536 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 TSSK3Q96PN8 268 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 BARD1Q99728 777 aaKnown RBP11.17□□□□□ -0.62
HMGB2-201ENST00000296503 C20orf27Q9GZN8 174 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 THAP1Q9NVV9 213 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 MAT2BQ9NZL9 334 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 GIMAP2Q9UG22 337 aa11.17□□□□□ -0.62
HMGB2-201ENST00000296503 C15orf38-AP3S2A0A0A6YYH1 394 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms