RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 UHRF2Q96PU4 802 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 TLR9Q9NR96 1032 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 HSPE1-MOB4S4R3N1 261 aa8.34□□□□□ -1.07
NIPBL-201ENST00000282516 DUOX1Q9NRD9 1551 aa8.34□□□□□ -1.08
NIPBL-201ENST00000282516 OR6C65A6NJZ3 312 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 E9PI62 339 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 GPR37L1O60883 481 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 SPATA31C1P0DKV0 1188 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 PTNP21246 168 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 FOXN2P32314 431 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 EVI2BP34910 448 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ACVR1BP36896 505 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 CYP1B1Q16678 543 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 DACT2Q5SW24 774 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ASPGQ86U10 573 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 TEX26Q8N6G2 289 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 OR5AK2Q8NH90 309 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 MYLIPQ8WY64 445 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 CD300AQ9UGN4 299 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 A0A1W2PPW3 197 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 C2orf78A6NCI8 922 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 J3QR89 54 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 DLX3O60479 287 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 MAGEB1P43366 347 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 RPS15AP62244 130 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 SPOCK1Q08629 439 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 BRICD5Q6PL45 260 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ACBD7Q8N6N7 88 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 C1orf127Q8N9H9 656 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF461Q8TAF7 563 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 DPF1Q92782 380 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 RSPRY1Q96DX4 576 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 SLC6A5Q9Y345 797 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 CFAP20Q9Y6A4 193 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 GALTP07902 379 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 PORP16435 677 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 PTGIRP43119 386 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 FABP6P51161 128 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 GBX1Q14549 363 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 DCP2Q8IU60 420 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 RBM12BQ8IXT5 1001 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 OR9A2Q8NGT5 310 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 LMX1AQ8TE12 382 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 GPN2Q9H9Y4 310 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 GLOD5A6NK44 160 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM233B4DJY2 109 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 KNG1P01042 644 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 P04436 131 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 TP53P04637 393 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 CD9P21926 228 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 CBLP22681 906 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 DBPQ10586 325 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ELOCQ15369 112 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF704Q6ZNC4 412 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 CERS5Q8N5B7 392 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 OR51B5Q9H339 312 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 MVB12BQ9H7P6 319 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 NCDNQ9UBB6 729 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 SIX4Q9UIU6 781 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 PRDM4Q9UKN5 801 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 UBFD1O14562 309 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 SLC22A5O76082 557 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM63AO94886 807 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 OR12D1P0DN82 309 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 PRSS3P35030 304 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 UBE2G2P60604 165 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ID2Q02363 134 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 FPGSQ05932 587 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 DLX2Q07687 328 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 HIST2H3PS2Q5TEC6 136 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 LIPJQ5W064 366 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 DPY19L2P1Q6NXN4 242 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ABHD12BQ7Z5M8 362 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM150AQ86TG1 271 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM151BQ8IW70 566 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM185AQ8NFB2 350 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 OR4K15Q8NH41 348 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 RBMXL1Q96E39 390 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ARHGEF28Q8N1W1 1705 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 FAM159BA6NKW6 160 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 SYT7O43581 403 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 POP7O75817 140 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 APLNRP35414 380 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 FXYD4P59646 89 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 GPR50Q13585 617 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 NKPD1Q17RQ9 610 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 KIAA1211LQ6NV74 962 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 KLBQ86Z14 1044 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 CYB5D2Q8WUJ1 264 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ELMOD3Q96FG2 381 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 POPDC3Q9HBV1 291 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 RNF11Q9Y3C5 154 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF536O15090 1300 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 CEP290O15078 2479 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 TARBP1Q13395 1621 aaKnown RBP8.33□□□□□ -1.08
NIPBL-201ENST00000282516 A0A1W2PPV4 95 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 P2RX6O15547 441 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 SPANXN4Q5MJ08 99 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 KBTBD6Q86V97 674 aa8.33□□□□□ -1.08
NIPBL-201ENST00000282516 ZFAND1Q8TCF1 268 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms