RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 TTC28Q96AY4 2481 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 A0A1B0GX78 115 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 FAM86C2PA6NEL3 165 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 G3V2T6 193 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 JRKO75564 520 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 SERPINB7O75635 380 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 DIRAS1O95057 198 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 HPRP00739 348 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 TNFRSF1BP20333 461 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 ALDH3A2P51648 485 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 DUSP5Q16690 384 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 C6orf52Q5T4I8 152 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 RHBDD2Q6NTF9 364 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 SHQ1Q6PI26 577 aaKnown RBP13.56□□□□□ -0.24
TRIM23-202ENST00000274327 OLIG3Q7RTU3 272 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 WDR53Q7Z5U6 358 aaPredicted RBP13.56□□□□□ -0.24
TRIM23-202ENST00000274327 HIPK1Q86Z02 1210 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 ZDHHC13Q8IUH4 622 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 GALNT12Q8IXK2 581 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 VWA5B2Q8N398 1253 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 CNDP2Q96KP4 475 aaKnown RBP13.56□□□□□ -0.24
TRIM23-202ENST00000274327 COL21A1Q96P44 957 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 GFM1Q96RP9 751 aaKnown RBP13.56□□□□□ -0.24
TRIM23-202ENST00000274327 GABARAPL1Q9H0R8 117 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 SLC38A1Q9H2H9 487 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 PIGUQ9H490 435 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF304Q9HCX3 659 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 ADAP2Q9NPF8 381 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 NECTIN3Q9NQS3 549 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 EXD2Q9NVH0 621 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 USE1Q9NZ43 259 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 CALML5Q9NZT1 146 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 SRPK3Q9UPE1 567 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 COL27A1Q8IZC6 1860 aaPredicted RBP13.56□□□□□ -0.24
TRIM23-202ENST00000274327 SEC16AO15027 2179 aa13.56□□□□□ -0.24
TRIM23-202ENST00000274327 LNP1A1A4G5 178 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 D6RAR5 112 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 H6PDO95479 791 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 LDOC1O95751 146 aaPredicted RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ALPLP05186 524 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 MAOAP21397 527 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 FBLP22087 321 aaKnown RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 PPP2R2BQ00005 443 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 PPP1R8Q12972 351 aaKnown RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 SERTAD2Q14140 314 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 PUM1Q14671 1186 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 EXOSC7Q15024 291 aaKnown RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ARHGAP11BQ3KRB8 267 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 GPAT3Q53EU6 434 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ATAD3BQ5T9A4 648 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 QSOX2Q6ZRP7 698 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 STK32CQ86UX6 486 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 KRT73Q86Y46 540 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 HS3ST5Q8IZT8 346 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 CDRT4Q8N9R6 151 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 FAM81AQ8TBF8 368 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 MAGEE2Q8TD90 523 aaPredicted RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 CDS1Q92903 461 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 NRBF2Q96F24 287 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 RBM18Q96H35 190 aaKnown RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 DGAT2Q96PD7 388 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF300Q96RE9 604 aaPredicted RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF347Q96SE7 839 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 STACQ99469 402 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 PELOQ9BRX2 385 aaKnown RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 OSBPL10Q9BXB5 764 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 AMBRA1Q9C0C7 1298 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 IFT80Q9P2H3 777 aaPredicted RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 NINQ8N4C6 2090 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 OR2W5A6NFC9 320 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 FLRT2O43155 660 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 COQ9O75208 318 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ZIC2O95409 532 aaPredicted RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 TFAP2AP05549 437 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 GP1BAP07359 652 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ALOX5P09917 674 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ITGA2P17301 1181 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 FPR1P21462 350 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ACP1P24666 158 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 DNAJA1P31689 397 aaKnown RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 OR1E2P47887 323 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 KCNC4Q03721 635 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 TRA2AQ13595 282 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 CYP27C1Q4G0S4 372 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 OTUD3Q5T2D3 398 aaPredicted RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 LAIR1Q6GTX8 287 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 C16orf62Q7Z3J2 963 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 CHERPQ8IWX8 916 aaKnown RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 CHDHQ8NE62 594 aaPredicted RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 OR52R1Q8NGF1 315 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 SLC9A6Q92581 669 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 TFAP2CQ92754 450 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 RIT1Q92963 219 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 PPP1R14BQ96C90 147 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 SDCCAG3Q96C92 435 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF354BQ96LW1 612 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 OR6C1Q96RD1 312 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 SPATA5L1Q9BVQ7 753 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 RBM38Q9H0Z9 239 aaKnown RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 DUSP22Q9NRW4 184 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms