RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 IL17BQ9UHF5 180 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 TCFL5Q9UL49 500 aa25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 FARSAQ9Y285 508 aaKnown RBP25.64■■□□□ 1.69
SMARCD3-201ENST00000262188 RNF103-CHMP3A0A140T963 221 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 C17orf105B2RV13 164 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 H3BNX3 289 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 DXOO77932 396 aaKnown RBP25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 PGM3O95394 542 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 SLC6A2P23975 617 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 SSTR4P31391 388 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 SERTAD2Q14140 314 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 ZNF267Q14586 743 aaPredicted RBP25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 ANGPTL8Q6UXH0 198 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 WDR53Q7Z5U6 358 aaPredicted RBP25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 DTX1Q86Y01 620 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 ICA1LQ8NDH6 482 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 NACC2Q96BF6 587 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 CLPTM1LQ96KA5 538 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 CNPPD1Q9BV87 410 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 NEUROD4Q9HD90 331 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 RAB26Q9ULW5 256 aa25.63■■□□□ 1.69
SMARCD3-201ENST00000262188 FRYQ5TBA9 3013 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 TERTO14746 1132 aaKnown RBP25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 FOLR3P41439 243 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 CCT3P49368 545 aaKnown RBP25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 SLC7A2P52569 658 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 RPS3AP61247 264 aaKnown RBP25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 EEF1A2Q05639 463 aaKnown RBP25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 TP53BP2Q13625 1128 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 SFT2D3Q587I9 215 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 IGF2-ASQ6U949 168 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 GALNT12Q8IXK2 581 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 PSMA8Q8TAA3 256 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 FBXO30Q8TB52 745 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 EQTNQ9NQ60 294 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 ZCCHC3Q9NUD5 404 aaKnown RBP25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 NXT1Q9UKK6 140 aaKnown RBP25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 CEPT1Q9Y6K0 416 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 FAM47E-STBD1D6RA91 191 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 UPK1AO00322 258 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 SORBS2O94875 1100 aaKnown RBP25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 BAG2O95816 211 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 HOXD11P31277 338 aaPredicted RBP25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 SOX11P35716 441 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 OR4D2P58180 307 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 DUSP8Q13202 625 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 RUNDC3AQ59EK9 446 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 COX20Q5RI15 118 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 HACD2Q6Y1H2 254 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 VASH2Q86V25 355 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 METTL25Q8N6Q8 603 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 ZFP90Q8TF47 636 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 METTL21AQ8WXB1 218 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 YIPF4Q9BSR8 244 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 TPT1P8Q9HAU6 139 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 CMTM6Q9NX76 183 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 USP22Q9UPT9 525 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 ERVK-19Q9WJR5 959 aa25.62■■□□□ 1.69
SMARCD3-201ENST00000262188 ZNF701M0R085 212 aaPredicted RBP25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 MASP2O00187 686 aa25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 CHI3L1P36222 383 aaPredicted RBP25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 PGAM4Q8N0Y7 254 aa25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 VWA5B2Q8N398 1253 aa25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 NXPE2Q96DL1 559 aa25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 PHF12Q96QT6 1004 aa25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 CPPED1Q9BRF8 314 aaPredicted RBP25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 GPATCH2Q9NW75 528 aa25.61■■□□□ 1.69
SMARCD3-201ENST00000262188 CLIC1O00299 241 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 OCM2P0CE71 109 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 OCMP0CE72 109 aaPredicted RBP25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 S1PR1P21453 382 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 UQCRC2P22695 453 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 RPS15P62841 145 aaKnown RBP25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 SPCS2Q15005 226 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 FHL5Q5TD97 284 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 TMEM125Q96AQ2 219 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 CDRT15Q96T59 188 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 THUMPD3Q9BV44 507 aaKnown RBP25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 SEMA3GQ9NS98 782 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 ZFHX4Q86UP3 3567 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 NME4O00746 187 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 SEC24DO94855 1032 aaPredicted RBP25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 RAB40ALP0C0E4 278 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 OTX2P32243 289 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 LRRC74AQ0VAA2 488 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 DCDC5Q6ZRR9 648 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 RNF130Q86XS8 419 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 CTHRC1Q96CG8 243 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 C16orf58Q96GQ5 468 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 OR8D2Q9GZM6 311 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 EPS8L2Q9H6S3 715 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 ADAP2Q9NPF8 381 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 ADA2Q9NZK5 511 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 CLCA3PQ9Y6N3 262 aa25.6■■□□□ 1.69
SMARCD3-201ENST00000262188 PRKNO60260 465 aaPredicted RBP25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 CBX7O95931 251 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 CD82P27701 267 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 IL10RAQ13651 578 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 ZNF829Q3KNS6 432 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms