RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 EPS8L2Q9H6S3 715 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 KAT8Q9H7Z6 458 aaKnown RBP19.22■□□□□ 0.67
RTCA-201ENST00000260563 C3orf14Q9HBI5 128 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 ZCCHC3Q9NUD5 404 aaKnown RBP19.22■□□□□ 0.67
RTCA-201ENST00000260563 CD300AQ9UGN4 299 aa19.22■□□□□ 0.67
RTCA-201ENST00000260563 EMC8O43402 210 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 IFI6P09912 130 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 GPX2P18283 190 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 SSTR4P31391 388 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 CCL11P51671 97 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 PRR5P85299 388 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 LIPEQ05469 1076 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 FUT7Q11130 342 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 TBR1Q16650 682 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 SPATS1Q496A3 300 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 SAXO2Q658L1 398 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 JMJD6Q6NYC1 403 aaPredicted RBP19.21■□□□□ 0.67
RTCA-201ENST00000260563 BHLHB9Q6PI77 547 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 SZRD1Q7Z422 152 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 HPS6Q86YV9 775 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 OR7G2Q8NG99 324 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 OR7G1Q8NGA0 311 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 OR56A1Q8NGH5 318 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 BRIX1Q8TDN6 353 aaKnown RBP19.21■□□□□ 0.67
RTCA-201ENST00000260563 EXTL1Q92935 676 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 NEURL3Q96EH8 262 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 NUDT9Q9BW91 350 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 ALG2Q9H553 416 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 PTGFRNQ9P2B2 879 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 ZNF223Q9UK11 482 aaPredicted RBP19.21■□□□□ 0.67
RTCA-201ENST00000260563 PKD1L2Q7Z442 2459 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 MGAQ8IWI9 3026 aa19.21■□□□□ 0.67
RTCA-201ENST00000260563 A6NL46 340 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 DNAJA2O60884 412 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 SORBS2O94875 1100 aaKnown RBP19.2■□□□□ 0.66
RTCA-201ENST00000260563 ME2P23368 584 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 SOX8P57073 446 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 TP53BP2Q13625 1128 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 TRMT12Q53H54 448 aaKnown RBP19.2■□□□□ 0.66
RTCA-201ENST00000260563 HSDL2Q6YN16 418 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 C6orf120Q7Z4R8 191 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 OR52N2Q8NGI0 321 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 OR10A6Q8NH74 314 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 DEFB126Q9BYW3 111 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 OR10A5Q9H207 317 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 RAD21L1Q9H4I0 556 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 DDX18Q9NVP1 670 aaKnown RBP19.2■□□□□ 0.66
RTCA-201ENST00000260563 SLC7A8Q9UHI5 535 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 BCAP29Q9UHQ4 241 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 ZNF639Q9UID6 485 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 A0A087WV62 115 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 UPK1AO00322 258 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 PLOD3O60568 738 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 PRAMEF2O60811 474 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 BCAS2O75934 225 aaPredicted RBP19.2■□□□□ 0.66
RTCA-201ENST00000260563 CBX7O95931 251 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 CLPSP04118 112 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 HSD17B1P14061 328 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 SOX18P35713 384 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 GSK3BP49841 420 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 MVDP53602 400 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 PRKAG1P54619 331 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 SLC37A1P57057 533 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 EXOSC7Q15024 291 aaKnown RBP19.2■□□□□ 0.66
RTCA-201ENST00000260563 RGNQ15493 299 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.2■□□□□ 0.66
RTCA-201ENST00000260563 SLC29A4Q7RTT9 530 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 RNF130Q86XS8 419 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 C10orf111Q8N326 155 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 OR2L13Q8N349 312 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 SIRT6Q8N6T7 355 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 FAM156AQ8NDB6 213 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 NUP43Q8NFH3 380 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 OR52R1Q8NGF1 315 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 ANKRA2Q9H9E1 313 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 GPATCH2Q9NW75 528 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 GPR83Q9NYM4 423 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 NTMQ9P121 344 aa19.2■□□□□ 0.66
RTCA-201ENST00000260563 DSPP15924 2871 aaKnown RBP19.2■□□□□ 0.66
RTCA-201ENST00000260563 OR6C76A6NM76 312 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 COQ9O75208 318 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 TCN1P20061 433 aaPredicted RBP19.19■□□□□ 0.66
RTCA-201ENST00000260563 S1PR1P21453 382 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 FADDQ13158 208 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 RAPSNQ13702 412 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 MYBPC3Q14896 1274 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 FHL5Q5TD97 284 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 SERPINA11Q86U17 422 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 IFNEQ86WN2 208 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 C9orf40Q8IXQ3 194 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 SLC5A8Q8N695 610 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 OR8K3Q8NH51 312 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 CCDC124Q96CT7 223 aaKnown RBP19.19■□□□□ 0.66
RTCA-201ENST00000260563 SLC35G5Q96KT7 338 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 ZNF583Q96ND8 569 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 KCTD14Q9BQ13 255 aaPredicted RBP19.19■□□□□ 0.66
RTCA-201ENST00000260563 PIF1Q9H611 641 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 GMPR2Q9P2T1 348 aaKnown RBP19.19■□□□□ 0.66
RTCA-201ENST00000260563 CFL2Q9Y281 166 aa19.19■□□□□ 0.66
RTCA-201ENST00000260563 TNRC6AQ8NDV7 1962 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms