RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 GARNL3Q5VVW2 1013 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 LAIR2Q6ISS4 152 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 OLIG3Q7RTU3 272 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 OR4D11Q8NGI4 311 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 VANGL1Q8TAA9 524 aaPredicted RBP25.88■■□□□ 1.73
CCM2-201ENST00000258781 SAP25Q8TEE9 199 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 SMOC1Q9H4F8 434 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 GAREM1Q9H706 876 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 ZNF556Q9HAH1 456 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 RLIMQ9NVW2 624 aa25.88■■□□□ 1.73
CCM2-201ENST00000258781 RP1P56715 2156 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 SYT5O00445 386 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 GALR2O43603 387 aaPredicted RBP25.87■■□□□ 1.73
CCM2-201ENST00000258781 CCDC159P0C7I6 412 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 MYF5P13349 255 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 CBLP22681 906 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 PPM1FP49593 454 aaPredicted RBP25.87■■□□□ 1.73
CCM2-201ENST00000258781 NUP107P57740 925 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 ESRRGP62508 458 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 CDK5R2Q13319 367 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 FAM53BQ14153 422 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 SLC23A3Q6PIS1 610 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 DEF8Q6ZN54 512 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 CEP76Q8TAP6 659 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 ADAMTS18Q8TE60 1221 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 ANKRD9Q96BM1 317 aaPredicted RBP25.87■■□□□ 1.73
CCM2-201ENST00000258781 HRASLS5Q96KN8 279 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 NMNAT1Q9HAN9 279 aaPredicted RBP25.87■■□□□ 1.73
CCM2-201ENST00000258781 PDE7BQ9NP56 450 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 ENOPH1Q9UHY7 261 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 BLACEA4D250 179 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 TNFRSF10AO00220 468 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 ALPPP05187 535 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 EEF1B2P24534 225 aaKnown RBP25.87■■□□□ 1.73
CCM2-201ENST00000258781 RPP38P78345 283 aaKnown RBP25.87■■□□□ 1.73
CCM2-201ENST00000258781 EXOSC6Q5RKV6 272 aaKnown RBP25.87■■□□□ 1.73
CCM2-201ENST00000258781 BROXQ5VW32 411 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 CARFQ8N187 725 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 SLC16A11Q8NCK7 471 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 TSC22D3Q99576 134 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 LRIT1Q9P2V4 623 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 RHCGQ9UBD6 479 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 TMCC3Q9ULS5 477 aa25.87■■□□□ 1.73
CCM2-201ENST00000258781 SLC1A7O00341 560 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 NUDT21O43809 227 aaKnown RBP25.86■■□□□ 1.73
CCM2-201ENST00000258781 SEMA7AO75326 666 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 OXSR1O95747 527 aaPredicted RBP25.86■■□□□ 1.73
CCM2-201ENST00000258781 H1F0P07305 194 aaKnown RBP25.86■■□□□ 1.73
CCM2-201ENST00000258781 RNH1P13489 461 aaKnown RBP25.86■■□□□ 1.73
CCM2-201ENST00000258781 NT5EP21589 574 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 EPHA2P29317 976 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 HPCAP84074 193 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 CHRNEQ04844 493 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 INAVAQ3KP66 663 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 TRMT12Q53H54 448 aaKnown RBP25.86■■□□□ 1.73
CCM2-201ENST00000258781 TCTE1Q5JU00 501 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 COMTD1Q86VU5 262 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 RBM45Q8IUH3 476 aaKnown RBP25.86■■□□□ 1.73
CCM2-201ENST00000258781 LACC1Q8IV20 430 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 OR9Q2Q8NGE9 314 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 TRIM45Q9H8W5 580 aaPredicted RBP25.86■■□□□ 1.73
CCM2-201ENST00000258781 SOHLH2Q9NX45 425 aa25.86■■□□□ 1.73
CCM2-201ENST00000258781 A0A0A6YYC8 382 aaPredicted RBP25.85■■□□□ 1.73
CCM2-201ENST00000258781 IGHV5-51A0A0C4DH38 117 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 I3L1I5 382 aaPredicted RBP25.85■■□□□ 1.73
CCM2-201ENST00000258781 B4GAT1O43505 415 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 FOXS1O43638 330 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 NSA2O95478 260 aaKnown RBP25.85■■□□□ 1.73
CCM2-201ENST00000258781 SLC35E2P0CK97 266 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 PRICKLE4Q2TBC4 344 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 ZCCHC12Q6PEW1 402 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 RABEPKQ7Z6M1 372 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 SHISA5Q8N114 240 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 PARP8Q8N3A8 854 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 NCSTNQ92542 709 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 CDS1Q92903 461 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 MAT2BQ9NZL9 334 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 SLC6A14Q9UN76 642 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 CEPT1Q9Y6K0 416 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 MED26O95402 600 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 ZBTB11O95625 1053 aaPredicted RBP25.85■■□□□ 1.73
CCM2-201ENST00000258781 EPPINO95925 133 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 ACP2P11117 423 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 AGXTP21549 392 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 CXCR4P61073 352 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 ARHGAP11BQ3KRB8 267 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 ZNF770Q6IQ21 691 aaPredicted RBP25.85■■□□□ 1.73
CCM2-201ENST00000258781 OR6C4Q8NGE1 309 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 TMIGD2Q96BF3 282 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 NIPSNAP1Q9BPW8 284 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 WFDC6Q9BQY6 131 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 PIGUQ9H490 435 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 NLGN3Q9NZ94 848 aa25.85■■□□□ 1.73
CCM2-201ENST00000258781 HYKKA2RU49 373 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 M0R3H8 397 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 FAAHO00519 579 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 ABCB7O75027 752 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 FUT4P22083 530 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 ELAVL4P26378 380 aaKnown RBP25.84■■□□□ 1.73
CCM2-201ENST00000258781 ALDH4A1P30038 563 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms