RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 NTSP30990 170 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 MC3RP41968 323 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 CASP3P42574 277 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 CORO7P57737 925 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 PLCXD2Q0VAA5 305 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 SLC10A1Q14973 349 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 EMC4Q5J8M3 183 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 TBCELQ5QJ74 424 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 TMEM107Q6UX40 140 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 LRIG3Q6UXM1 1119 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 NPSR1Q6W5P4 371 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 RPTNQ6XPR3 784 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 HOMEZQ8IX15 550 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 CLHC1Q8NHS4 586 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 HGDQ93099 445 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 PGM2Q96G03 612 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 RILPQ96NA2 401 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 DMRTA2Q96SC8 542 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 ANGPTL4Q9BY76 406 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 FOLH1BQ9HBA9 442 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 TMED5Q9Y3A6 229 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 CENPEQ02224 2701 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 NAV2Q8IVL1 2488 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 CRYBG3Q68DQ2 2970 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 A0A1B0GVC2 190 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 NPIPA2E9PIF3 369 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 NPIPA3F8WFD2 350 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 TM9SF1O15321 606 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 AKAP10O43572 662 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 UGT2B11O75310 529 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 BCKDHAP12694 445 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 CHI3L2Q15782 390 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 ZNF385BQ569K4 471 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 FNDC7Q5VTL7 733 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 SLC34A3Q8N130 599 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 ZNF808Q8N4W9 903 aaPredicted RBP21.04■□□□□ 0.96
LSM4-201ENST00000252816 ZNF597Q96LX8 424 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 NODALQ96S42 347 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 TNFRSF10DQ9UBN6 386 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 ACTL7BQ9Y614 415 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 NCKAP5O14513 1909 aa21.04■□□□□ 0.96
LSM4-201ENST00000252816 NCOA6Q14686 2063 aaPredicted RBP21.03■□□□□ 0.96
LSM4-201ENST00000252816 A0A087WV62 115 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 E9PLN8 166 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 PLOD2O00469 737 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 BIRC5O15392 142 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 ERN1O75460 977 aaKnown RBP21.03■□□□□ 0.96
LSM4-201ENST00000252816 SKAP2O75563 359 aaPredicted RBP21.03■□□□□ 0.96
LSM4-201ENST00000252816 ZNF551Q7Z340 670 aaPredicted RBP21.03■□□□□ 0.96
LSM4-201ENST00000252816 NUP54Q7Z3B4 507 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 CROCCP2Q86T23 111 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 PPP1R14CQ8TAE6 165 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 TMBIM1Q969X1 311 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 CIDECQ96AQ7 238 aaPredicted RBP21.03■□□□□ 0.96
LSM4-201ENST00000252816 ZNF764Q96H86 408 aaPredicted RBP21.03■□□□□ 0.96
LSM4-201ENST00000252816 VKORC1Q9BQB6 163 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 STMN4Q9H169 189 aaPredicted RBP21.03■□□□□ 0.96
LSM4-201ENST00000252816 REEP4Q9H6H4 257 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 KCNK9Q9NPC2 374 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 TAS2R9Q9NYW1 312 aa21.03■□□□□ 0.96
LSM4-201ENST00000252816 C19orf53Q9UNZ5 99 aaPredicted RBP21.03■□□□□ 0.96
LSM4-201ENST00000252816 UPK1AO00322 258 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 SUSD5O60279 629 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 PEX11AO75192 247 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 SLITRK5O94991 958 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 SNX4O95219 450 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 HSPA4LO95757 839 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 SERPINE1P05121 402 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 ENDOUP21128 410 aaKnown RBP21.02■□□□□ 0.96
LSM4-201ENST00000252816 RPP38P78345 283 aaKnown RBP21.02■□□□□ 0.96
LSM4-201ENST00000252816 PDE7AQ13946 482 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 CDSNQ15517 529 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 BEND6Q5SZJ8 279 aaPredicted RBP21.02■□□□□ 0.96
LSM4-201ENST00000252816 TMEM198Q66K66 360 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 ZNF787Q6DD87 383 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 MARVELD2Q8N4S9 558 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 ELP4Q96EB1 424 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 PPP3R2Q96LZ3 170 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 C20orf27Q9GZN8 174 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 PNPLA3Q9NST1 481 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 CELSR2Q9HCU4 2923 aa21.02■□□□□ 0.96
LSM4-201ENST00000252816 TRGV5A0A0B4J1U4 118 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 OR14I1A6ND48 311 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 AQP7O14520 342 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 PDPK1O15530 556 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 TBX19O60806 448 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 ZWINTO95229 277 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 PSMG1O95456 288 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 DCTP40126 519 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 PTGDSP41222 190 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 MAN2A2P49641 1150 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 ABCE1P61221 599 aaKnown RBP21.01■□□□□ 0.95
LSM4-201ENST00000252816 ART3Q13508 389 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 GXYLT1Q4G148 440 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 TMEM81Q6P7N7 255 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 PACS2Q86VP3 889 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 OR2L13Q8N349 312 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 RPRMLQ8N4K4 120 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 OR4N2Q8NGD1 307 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 OR5M9Q8NGP3 310 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms