RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF311Q5JNZ3 666 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 ENTPD8Q5MY95 495 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 PAQR7Q86WK9 346 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 LCN9Q8WX39 176 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 GIMAP5Q96F15 307 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 TRMT61AQ96FX7 289 aaKnown RBP18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 MND1Q9BWT6 205 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 EGLN3Q9H6Z9 239 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 KLF15Q9UIH9 416 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 MKLN1Q9UL63 735 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 CFL2Q9Y281 166 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 COLEC10Q9Y6Z7 277 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 A0A1W2PQF6 199 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 SAGE2PA6NJ88 616 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 H0Y8X5 98 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 WWP2O00308 870 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 ZIC2O95409 532 aaPredicted RBP18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 SOX6P35712 828 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 LINC00471Q8N535 108 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 CCL4L1Q8NHW4 92 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 OR1E3Q8WZA6 343 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 LRR1Q96L50 414 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 CNPPD1Q9BV87 410 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 CHCHD3Q9NX63 227 aaKnown RBP18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 ZNF624Q9P2J8 865 aaPredicted RBP18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 PEX16Q9Y5Y5 336 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 HEBP2Q9Y5Z4 205 aa18.34■□□□□ 0.53
CDC42EP1-201ENST00000249014 ISPDA4D126 451 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 ENDOUP21128 410 aaKnown RBP18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 PRAMEF8Q5VWM4 474 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 PRAMEF7Q5VXH5 474 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 IL17RCQ8NAC3 791 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR52I1Q8NGK6 324 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 ZNF582Q96NG8 517 aaPredicted RBP18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 GABRG3Q99928 467 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 KCNS3Q9BQ31 491 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 C3orf14Q9HBI5 128 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 EXOSC4Q9NPD3 245 aaKnown RBP18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 CD93Q9NPY3 652 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR6C2Q9NZP2 312 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 ZNF229Q9UJW7 825 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 CAB39Q9Y376 341 aaPredicted RBP18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 UGT2A1Q9Y4X1 527 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 ZNF780BQ9Y6R6 833 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 SCN2AQ99250 2005 aa18.33■□□□□ 0.52
CDC42EP1-201ENST00000249014 TRBV23OR9-2A0A075B6M9 112 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 RFXAPO00287 272 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 CTDSP2O14595 271 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 ZNF888P0CJ79 500 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 CRYBB2P43320 205 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 TAS2R41P59536 307 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 SLC25A30Q5SVS4 291 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 RNLSQ5VYX0 342 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 ENPP7Q6UWV6 458 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 PRICKLE2Q7Z3G6 844 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 RD3Q7Z3Z2 195 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 NRROSQ86YC3 692 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 PROKR2Q8NFJ6 384 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 C10orf90Q96M02 699 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 ARHGDIGQ99819 225 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 POLR2J2Q9GZM3 115 aaKnown RBP18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 SEMA4GQ9NTN9 838 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 GIMAP4Q9NUV9 329 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 TESQ9UGI8 421 aaKnown RBP18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 F5P12259 2224 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 CPSF4LA6NMK7 179 aaKnown RBP18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 FCMRO60667 390 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 CYP7B1O75881 506 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 ALPPP05187 535 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 TRHRP34981 398 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 RPS19P39019 145 aaKnown RBP18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 TGM3Q08188 693 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 ANKRD54Q6NXT1 300 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 FAM111BQ6SJ93 734 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 ASPNQ9BXN1 380 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 NUAK2Q9H093 628 aa18.32■□□□□ 0.52
CDC42EP1-201ENST00000249014 SYT5O00445 386 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 ASNA1O43681 348 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 NR2F6P10588 404 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 ETV5P41161 510 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 ETV1P50549 477 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 HOXC5Q00444 222 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 CDC20Q12834 499 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 CBX3Q13185 183 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 C6orf132Q5T0Z8 1188 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 TRIM73Q86UV7 250 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 POC5Q8NA72 575 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 ZBTB8BQ8NAP8 495 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 SIMC1Q8NDZ2 872 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR8D4Q8NGM9 314 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 HTRA1Q92743 480 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 DIO2Q92813 273 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 GAL3ST3Q96A11 431 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 SLC35A4Q96G79 324 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 CDCA3Q99618 268 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 BARHL1Q9BZE3 327 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 MIR1-1HGQ9H1L0 117 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 SP140LQ9H930 580 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 NDUFB11Q9NX14 153 aa18.31■□□□□ 0.52
CDC42EP1-201ENST00000249014 LYARQ9NX58 379 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms