RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 IDH3GP51553 393 aaPredicted RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 MCATQ8IVS2 390 aaKnown RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 BOLA2-SMG1P6H3BVE0 249 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 MAP2K7O14733 419 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 BMP1P13497 986 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 RBPJQ06330 500 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 SMAD2Q15796 467 aaKnown RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 RAB11BQ15907 218 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 TMEM236Q5W0B7 351 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 REEP4Q9H6H4 257 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 RPF2Q9H7B2 306 aaKnown RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 SFXN1Q9H9B4 322 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 ZNF160Q9HCG1 818 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 FAM230AA0A1W2PPH8 454 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 LBX1P52954 281 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 CSNK2A1P68400 391 aaPredicted RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 TAP2Q03519 686 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 PLCXD3Q63HM9 321 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 CSNK2A3Q8NEV1 391 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 HAS2Q92819 552 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 FAM71F1Q96KD3 344 aaPredicted RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 OR4K3Q96R72 315 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 C3P01024 1663 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 CBX7O95931 251 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 PTGER4P35408 488 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 RPS15AP62244 130 aaKnown RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 MPP7Q5T2T1 576 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 CST9LP1Q5W188 147 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 SLC27A4Q6P1M0 643 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 METTL2BQ6P1Q9 378 aaKnown RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 ASRGL1Q7L266 308 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 SHFQ7M4L6 423 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 SLC35F5Q8WV83 523 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 BADQ92934 168 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 DHX33Q9H6R0 707 aaKnown RBP12.6□□□□□ -0.39
NEK9-201ENST00000238616 SOWAHBA6NEL2 793 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 TBPL1P62380 186 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 ARL16Q0P5N6 197 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 FBXL20Q96IG2 436 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 ARNT2Q9HBZ2 717 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 ZNF446Q9NWS9 450 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 ZIM2Q9NZV7 527 aa12.6□□□□□ -0.39
NEK9-201ENST00000238616 CDK3Q00526 305 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 KIAA0319Q5VV43 1072 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 ZNF529Q6P280 563 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 CNN2Q99439 309 aaKnown RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 TP63Q9H3D4 680 aaPredicted RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 H2AFB2P0C5Z0 115 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 MS4A13Q5J8X5 152 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 RAB9BQ9NP90 201 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 TMEM45AQ9NWC5 275 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 MANBAO00462 879 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 SHC2P98077 582 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 ENKD1Q9H0I2 346 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 MGAT4BQ9UQ53 548 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 ANKRD36CQ5JPF3 1778 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 PRICKLE3O43900 615 aaPredicted RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 ZNF33BQ06732 778 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 FGL2Q14314 439 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 HES1Q14469 280 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 TGFBIQ15582 683 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 KIAA0930Q6ICG6 404 aaPredicted RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 NTAN1Q96AB6 310 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 SENP5Q96HI0 755 aaPredicted RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 TESQ9UGI8 421 aaKnown RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 GPR52Q9Y2T5 361 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 CXorf49A8MYA2 514 aaPredicted RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 BMP4P12644 408 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 HTR2AP28223 471 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 C15orf52Q6ZUT6 534 aaKnown RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 HDHD5Q9BXW7 423 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 SYNPO2LQ9H987 977 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 PLCXD1Q9NUJ7 323 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 ZNF142P52746 1687 aaPredicted RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 CLIC3O95833 236 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 MGST1P10620 155 aaKnown RBP12.59□□□□□ -0.39
NEK9-201ENST00000238616 SLC36A3Q495N2 470 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 TUBA3EQ6PEY2 450 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 HS3ST5Q8IZT8 346 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 OR7G1Q8NGA0 311 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 TSGA13Q96PP4 275 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 ARHGAP23Q9P227 1491 aa12.59□□□□□ -0.39
NEK9-201ENST00000238616 A8MT66 165 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 HEPACAM2A8MVW5 462 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 A8MXE2 369 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 DVL1O14640 695 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 RNH1P13489 461 aaKnown RBP12.58□□□□□ -0.39
NEK9-201ENST00000238616 PTPN6P29350 595 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 SGSHP51688 502 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 DVL1P1P54792 670 aaPredicted RBP12.58□□□□□ -0.39
NEK9-201ENST00000238616 TRAM1Q15629 374 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 SLC22A6Q4U2R8 563 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 ARL6Q9H0F7 186 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 SEC14L4Q9UDX3 406 aa12.58□□□□□ -0.39
NEK9-201ENST00000238616 RHBDD3Q9Y3P4 386 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms