RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PPICP45877 212 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 NR0B1P51843 470 aaKnown RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 DIO3P55073 304 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 MRPS22P82650 360 aaKnown RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 MRPS35P82673 323 aaKnown RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 PRR5P85299 388 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 LRRC74AQ0VAA2 488 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 HSPB3Q12988 150 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 LTB4RQ15722 352 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 MAPKAPK3Q16644 382 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 GSTA3Q16772 222 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 BHLHB9Q6PI77 547 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 TMEM107Q6UX40 140 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 IL20RBQ6UXL0 311 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 CAMKMTQ7Z624 323 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 RIMKLAQ8IXN7 391 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 CISD2Q8N5K1 135 aaKnown RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 Q8NA96 180 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 GLB1L3Q8NCI6 653 aaPredicted RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 DOK4Q8TEW6 326 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 SSC4DQ8WTU2 575 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 OR5P2Q8WZ92 322 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 KAT2AQ92830 837 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 MOAP1Q96BY2 351 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 COQ8BQ96D53 544 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 SPACA9Q96E40 222 aaPredicted RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 ELP4Q96EB1 424 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 SCMH1Q96GD3 660 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 MAELQ96JY0 434 aaKnown RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 SIGLEC12Q96PQ1 595 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 DUSP26Q9BV47 211 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 WDR55Q9H6Y2 383 aaPredicted RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 LIN28AQ9H9Z2 209 aaKnown RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 MRTO4Q9UKD2 239 aaKnown RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 C19orf53Q9UNZ5 99 aaPredicted RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 EXO1Q9UQ84 846 aaKnown RBP10.42□□□□□ -0.74
SF3B6-201ENST00000233468 CSAG2Q9Y5P2 127 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 NUP210LQ5VU65 1888 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 GOLGA8QA0A0J9YX86 632 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 GOLGA8OA6NCC3 632 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 FRG2CA6NGY1 282 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 GOLGA8NF8WBI6 632 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 NME2P1O60361 137 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 OR6B1O95007 311 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 CLPSP04118 112 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 P04436 131 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 KRT16P08779 473 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 FBXO45P0C2W1 286 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 NME2P22392 152 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 SOX3P41225 446 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 MC3RP41968 323 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 FRKP42685 505 aaPredicted RBP10.41□□□□□ -0.74
SF3B6-201ENST00000233468 KIR3DL1P43629 444 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 EMDP50402 254 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 PSMD4P55036 377 aaKnown RBP10.41□□□□□ -0.74
SF3B6-201ENST00000233468 STX1BP61266 288 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 DUSP2Q05923 314 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 EXOSC7Q15024 291 aaKnown RBP10.41□□□□□ -0.74
SF3B6-201ENST00000233468 PGS1Q32NB8 556 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 TBCELQ5QJ74 424 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 ANKRD26P1Q6NSI1 321 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 ZCCHC12Q6PEW1 402 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 EPGNQ6UW88 154 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 OR2L13Q8N349 312 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 AMER2Q8N7J2 671 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF441Q8N8Z8 693 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 OR7G2Q8NG99 324 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 OR7A2PQ8NGA2 310 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 OR8J2Q8NGG1 315 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 ADIPOR1Q96A54 375 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 CIDECQ96AQ7 238 aaPredicted RBP10.41□□□□□ -0.74
SF3B6-201ENST00000233468 TESCQ96BS2 214 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 SNRNP40Q96DI7 357 aaKnown RBP10.41□□□□□ -0.74
SF3B6-201ENST00000233468 SECISBP2Q96T21 854 aaKnown RBP10.41□□□□□ -0.74
SF3B6-201ENST00000233468 CCDC28BQ9BUN5 200 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 SLCO1B3Q9NPD5 702 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 TCF7L2Q9NQB0 619 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 KLHL1Q9NR64 748 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 SACM1LQ9NTJ5 587 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 AIG1Q9NVV5 245 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 CNIH4Q9P003 139 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 OR10H1Q9Y4A9 318 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 NPFFR2Q9Y5X5 522 aa10.41□□□□□ -0.74
SF3B6-201ENST00000233468 E9PBE3 544 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 UPK1AO00322 258 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 RNASET2O00584 256 aaKnown RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 TO15178 435 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 CFLARO15519 480 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 EMC8O43402 210 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ERN1O75460 977 aaKnown RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 TROVE2P10155 538 aaKnown RBP eCLIP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 LAMP1P11279 417 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 S100A3P33764 101 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 PRIM2P49643 509 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 AQP5P55064 265 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 PLCXD2Q0VAA5 305 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF155Q12901 538 aaPredicted RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ELOAQ14241 798 aaKnown RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF791Q3KP31 576 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms