RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SPHK1Q9NYA1 384 aa20.65■□□□□ 0.9
SMARCD2-201ENST00000225742 DUXAA6NLW8 204 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 PRODHO43272 600 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 HBQ1P09105 142 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 SOX3P41225 446 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 DUSP2Q05923 314 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 ST3GAL3Q11203 375 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 SLC13A2Q13183 592 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 SNAPC1Q16533 368 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 TMEM44Q2T9K0 475 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 ACSM5Q6NUN0 579 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 RASSF6Q6ZTQ3 369 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 MTSS1LQ765P7 747 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 WDR53Q7Z5U6 358 aaPredicted RBP20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 FAM20CQ8IXL6 584 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 OR14C36Q8NHC7 312 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 ELSPBP1Q96BH3 223 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 LRR1Q96L50 414 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 SLC38A2Q96QD8 506 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 OR2M4Q96R27 311 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 NTMQ9P121 344 aa20.64■□□□□ 0.9
SMARCD2-201ENST00000225742 STK25O00506 426 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 DLGAP3O95886 979 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 APOA1P02647 267 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 ASGR2P07307 311 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 CHRM5P08912 532 aaPredicted RBP20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 ACP2P11117 423 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 CPEP16870 476 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 MYL12AP19105 171 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 SEPHS1P49903 392 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 KIAA1024LP59773 190 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 RGS1Q08116 209 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 TJAP1Q5JTD0 557 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 SLC27A4Q6P1M0 643 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 UBE2Q1Q7Z7E8 422 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 PHC2Q8IXK0 858 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 TOR1AIP2Q8NFQ8 470 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 WDFY2Q96P53 400 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 MACROD1Q9BQ69 325 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 PRDM9Q9NQV7 894 aa20.64■□□□□ 0.89
SMARCD2-201ENST00000225742 KIAA0100Q14667 2235 aaKnown RBP20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 A0A087WUU8 490 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 TMEM129A0AVI4 362 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 SLC35F4A4IF30 521 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 TMEM221A6NGB7 291 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 ISM1B1AKI9 464 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 STATHP02808 62 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 DNTTP04053 509 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 NR2F6P10588 404 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 GTF2E2P29084 291 aaKnown RBP20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 GDI1P31150 447 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 RPS19P39019 145 aaKnown RBP20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 KIR2DL1P43626 348 aaPredicted RBP20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 BNC1Q01954 994 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 ZNF750Q32MQ0 723 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 USP30Q70CQ3 517 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 AMIGO1Q86WK6 493 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 KIF18BQ86Y91 864 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 PIGXQ8TBF5 258 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 SETD6Q8TBK2 473 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 HPS1Q92902 700 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 SLC22A18Q96BI1 424 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 GPA33Q99795 319 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 KCNS3Q9BQ31 491 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 EXOSC1Q9Y3B2 195 aaKnown RBP20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 KCNE3Q9Y6H6 103 aa20.63■□□□□ 0.89
SMARCD2-201ENST00000225742 IQCMA0A1B0GVH7 501 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 FAM170BA6NMN3 283 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 UBXN7O94888 489 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 IL1AP01583 271 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 HOXB3P14651 431 aaPredicted RBP20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 MC3RP41968 323 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 STAT5AP42229 794 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 RAB8AP61006 207 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 CHRNEQ04844 493 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 RUNX1T1Q06455 604 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 DECR1Q16698 335 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 MINDY4Q4G0A6 757 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 HEPHL1Q6MZM0 1159 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 OLIG3Q7RTU3 272 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 C16orf62Q7Z3J2 963 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 HTRA1Q92743 480 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 DIO2Q92813 273 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 OTUB1Q96FW1 271 aaPredicted RBP20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 TEX12Q9BXU0 123 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 SAP130Q9H0E3 1048 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 PHF11Q9UIL8 331 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 DOCK9Q9BZ29 2069 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 PRR23AA6NEV1 266 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 KDM4EB2RXH2 506 aaPredicted RBP20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 CTDSP2O14595 271 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 ATP6V1G1O75348 118 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 C8orf89P0DMQ9 161 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 ALPPL2P10696 532 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 TNFSF8P32971 234 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 GAS1P54826 345 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 WNT4P56705 351 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 BTN3A2P78410 334 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 ASPGQ86U10 573 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 OR9A2Q8NGT5 310 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms