RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ZBED6CLQ96FA7 236 aaPredicted RBP14.21□□□□□ -0.14
EFNB1-201ENST00000204961 HHIPQ96QV1 700 aa14.21□□□□□ -0.14
EFNB1-201ENST00000204961 SIGLEC11Q96RL6 698 aa14.21□□□□□ -0.14
EFNB1-201ENST00000204961 REV1Q9UBZ9 1251 aa14.21□□□□□ -0.14
EFNB1-201ENST00000204961 H0Y8X5 98 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 SOCS6O14544 535 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 KELP23276 732 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 BSGP35613 385 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 P2RY2P41231 377 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 HCCSP53701 268 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 ZNF45Q02386 682 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 EEF1A2Q05639 463 aaKnown RBP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 NCF4Q15080 339 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 SYT14P1Q58G82 188 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 MLIPQ5VWP3 458 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 OTPQ5XKR4 325 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 MSANTD1Q6ZTZ1 278 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 ZNF367Q7RTV3 350 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 NUDT13Q86X67 352 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 ASCC1Q8N9N2 400 aaKnown RBP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 IL17RDQ8NFM7 739 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 SAP130Q9H0E3 1048 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 INSL6Q9Y581 213 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 CENPVL1A0A0U1RR11 272 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 CCDC182A6NF36 153 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 HSD3B1P14060 373 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 HSD3B2P26439 372 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 RGS8P57771 180 aaPredicted RBP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 SRP54P61011 504 aaKnown RBP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 TIMM50Q3ZCQ8 353 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 DEFB134Q4QY38 66 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 FLYWCH1Q4VC44 716 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 IDNKQ5T6J7 187 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 METTL2BQ6P1Q9 378 aaKnown RBP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 HDDC3Q8N4P3 179 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 OR51A7Q8NH64 312 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 CCL4L1Q8NHW4 92 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 TEX47Q8TBZ9 253 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 GRHL3Q8TE85 626 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 OR2A14Q96R47 310 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 IRF2BPLQ9H1B7 796 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 A0A087WUU8 490 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 MEIOCA2RUB1 952 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 SAGE2PA6NJ88 616 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 NPIPB8E9PQR5 432 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 CDC123O75794 336 aaPredicted RBP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 CCNYL3P0C7X3 344 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 NR2F6P10588 404 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 CAMK2BQ13554 666 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 ZNF79Q15937 498 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 TIGD4Q8IY51 512 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 SGPP1Q9BX95 441 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 SP140LQ9H930 580 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 LHX9Q9NQ69 397 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 SIRT3Q9NTG7 399 aaPredicted RBP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 MAT2BQ9NZL9 334 aa14.2□□□□□ -0.14
EFNB1-201ENST00000204961 RPL36Q9Y3U8 105 aaKnown RBP14.2□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3DA0A087WVF3 549 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3IA0A087WXS9 549 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3EA0A087X179 549 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3KA0A087X1G2 549 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3FA6NER0 549 aaPredicted RBP14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3LB9A6J9 549 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3HP0C7X1 549 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 ACVR1BP36896 505 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 CRYBB2P43320 205 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 LARS2Q15031 903 aaKnown RBP14.19□□□□□ -0.14
EFNB1-201ENST00000204961 GXYLT1Q4G148 440 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TOR1AIP1Q5JTV8 583 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 AGAP6Q5VW22 663 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3GQ6DHY5 549 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3CQ6IPX1 549 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 FIGNL1Q6PIW4 674 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 LYPD8Q6UX82 237 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 RPTNQ6XPR3 784 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 KRT73Q86Y46 540 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 KLHDC8AQ8IYD2 350 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D3Q8IZP1 549 aaPredicted RBP14.19□□□□□ -0.14
EFNB1-201ENST00000204961 SLC16A11Q8NCK7 471 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 FLCNQ8NFG4 579 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 OR8D4Q8NGM9 314 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 PHF21AQ96BD5 680 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 PDXPQ96GD0 296 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 AGAP4Q96P64 663 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 SECISBP2Q96T21 854 aaKnown RBP14.19□□□□□ -0.14
EFNB1-201ENST00000204961 MRPL15Q9P015 296 aaKnown RBP14.19□□□□□ -0.14
EFNB1-201ENST00000204961 PTGFRNQ9P2B2 879 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 CRNNQ9UBG3 495 aaPredicted RBP14.19□□□□□ -0.14
EFNB1-201ENST00000204961 ASXL3Q9C0F0 2248 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TRAV6A0A075B6T7 132 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 MEN1O00255 615 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 BTN3A3O00478 584 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 EFEMP2O95967 443 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 CHRNB1P11230 501 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 TRHRP34981 398 aaPredicted RBP14.19□□□□□ -0.14
EFNB1-201ENST00000204961 PPM1AP35813 382 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 SLC9A3P48764 834 aa14.19□□□□□ -0.14
EFNB1-201ENST00000204961 PCBP3P57721 371 aaKnown RBP14.19□□□□□ -0.14
EFNB1-201ENST00000204961 SLC3A1Q07837 685 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms