RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 NT5EP21589 574 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 MPIP34949 423 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 PTGER1P34995 402 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 GPC1P35052 558 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 CDKN2CP42773 168 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 STT3AP46977 705 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 CDK9P50750 372 aaKnown RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 MNAT1P51948 309 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 MANFP55145 182 aaKnown RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 HBA1P69905 142 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 IGLV3-21P80748 117 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 BNIP1Q12981 228 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 GAB1Q13480 694 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 ART3Q13508 389 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 SERTAD2Q14140 314 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 CAPRIN1Q14444 709 aaKnown RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 MLC1Q15049 377 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 LTB4RQ15722 352 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 SPRED3Q2MJR0 410 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 TRMT5Q32P41 509 aaKnown RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 SPNS3Q6ZMD2 512 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 ZNF551Q7Z340 670 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 TMEM151BQ8IW70 566 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 CCDC116Q8IYX3 515 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 DPP10Q8N608 796 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 RBMXL3Q8N7X1 1067 aaKnown RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 ENDOVQ8N8Q3 282 aaKnown RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 TMEM102Q8N9M5 508 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 ST6GALNAC3Q8NDV1 305 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 FDCSPQ8NFU4 85 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 FBXO27Q8NI29 283 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 GTF2H4Q92759 462 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 PTCHD1Q96NR3 888 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 DGAT2Q96PD7 388 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 PANX1Q96RD7 426 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 ALOXE3Q9BYJ1 711 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 PAIP1Q9H074 479 aaKnown RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 EFCAB1Q9HAE3 211 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 IL1RL2Q9HB29 575 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 SLAMF8Q9P0V8 285 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 C3orf18Q9UK00 162 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 MKL2Q9ULH7 1088 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 PADI2Q9Y2J8 665 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 PTRH2Q9Y3E5 179 aaKnown RBP8.76□□□□□ -1.01
PHGDH-228ENST00000641847 CLDN16Q9Y5I7 305 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 POLEQ07864 2286 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 SCN2AQ99250 2005 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 SVILO95425 2214 aa8.76□□□□□ -1.01
PHGDH-228ENST00000641847 RNF103-CHMP3A0A140T963 221 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 A0A1B0GUH1 482 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 TCRBV16S1A1N1A0A5B0 115 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SYNDIG1LA6NDD5 238 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 B2RBV5 119 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 IDSB3KWA1 339 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 FXYD1O00168 92 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 HNRNPCL1O60812 293 aaKnown RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 ZG16O60844 167 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 ALOX12BO75342 701 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 ERN1O75460 977 aaKnown RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 ATP5HO75947 161 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 UNC5CO95185 931 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 CYC1P08574 325 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 RAB40ALP0C0E4 278 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SLC35E2P0CK97 266 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 COX6B1P14854 86 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 FOLR3P41439 243 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 TRPC1P48995 793 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 EMP2P54851 167 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 PLEKHN1Q494U1 663 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SPDYE7PQ495Y7 208 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 GTDC1Q4AE62 458 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 ZNF628Q5EBL2 1059 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 LRIF1Q5T3J3 769 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 C6orf163Q5TEZ5 329 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 FAM69BQ5VUD6 431 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 FAAH2Q6GMR7 532 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 TMEM107Q6UX40 140 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 HACD2Q6Y1H2 254 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 RINLQ6ZS11 566 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 LANCL3Q6ZV70 420 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SZRD1Q7Z422 152 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 MSRB3Q8IXL7 192 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 ST13P4Q8IZP2 240 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 CLEC4FQ8N1N0 589 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 RBM15BQ8NDT2 890 aaKnown RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 PLPP5Q8NEB5 264 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 OR2Y1Q8NGV0 311 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 PPWD1Q96BP3 646 aaKnown RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 ROPN1LQ96C74 230 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SMAD5Q99717 465 aaKnown RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 PELOQ9BRX2 385 aaKnown RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SLC39A3Q9BRY0 314 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 CXorf36Q9H7Y0 433 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SLC6A13Q9NSD5 602 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SIRT3Q9NTG7 399 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 GID8Q9NWU2 228 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 TAS2R9Q9NYW1 312 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms