RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 SLC30A8Q8IWU4 369 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 PIANPQ8IYJ0 282 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 CLECL1Q8IZS7 167 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 VN1R2Q8NFZ6 395 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 FIBINQ8TAL6 211 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 WNT2BQ93097 391 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 SLC25A37Q9NYZ2 338 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 MGAT4CQ9UBM8 478 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 TNPO3Q9Y5L0 923 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 CFAP20Q9Y6A4 193 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 WNT6Q9Y6F9 365 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 SCN8AQ9UQD0 1980 aa11.24□□□□□ -0.61
RBFOX1-224ENST00000641259 OR5K3A6NET4 321 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 WISP3O95389 354 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 MT-ND4P03905 459 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 FABP1P07148 127 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 INSL4Q14641 139 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 SHHQ15465 462 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 TMEM215Q68D42 235 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 PSAPL1Q6NUJ1 521 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 KIAA1211LQ6NV74 962 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 C8orf82Q6P1X6 216 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 TRIM40Q6P9F5 258 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 RSPRY1Q96DX4 576 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 PFDN5Q99471 154 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 ADAT1Q9BUB4 502 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 NLE1Q9NVX2 485 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 FKBPLQ9UIM3 349 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 GPR52Q9Y2T5 361 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 MED16Q9Y2X0 877 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 C5orf58C9J3I9 102 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 RFXAPO00287 272 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 STX16O14662 325 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 UCHL1P09936 223 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 JUNDP17535 347 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 CHI3L1P36222 383 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 CXCR4P61073 352 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 RPS14P62263 151 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 BEX5Q5H9J7 111 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 C9orf152Q5JTZ5 239 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 FAM74A1Q5RGS3 127 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 KIAA1161Q6NSJ0 714 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 CFAP206Q8IYR0 622 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 SAMD14Q8IZD0 417 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 ZC3H10Q96K80 434 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 CMSS1Q9BQ75 279 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 WDR77Q9BQA1 342 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 DPAGT1Q9H3H5 408 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 TDP1Q9NUW8 608 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 ASCC3Q8N3C0 2202 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 GBAP04062 536 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 RLN2P04090 185 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 MESP2Q0VG99 397 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 ADAM15Q13444 863 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 SLC14A2Q15849 920 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 ZNF77Q15935 545 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 CAPN13Q6MZZ7 669 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 MZT2AQ6P582 158 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 OR8J3Q8NGG0 315 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 NEIL3Q8TAT5 605 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 TEX47Q8TBZ9 253 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 TTC9Q92623 222 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 TCEAL3Q969E4 200 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 REPS1Q96D71 796 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 TSSK6Q9BXA6 273 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 KLHL31Q9H511 634 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 POT1Q9NUX5 634 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 NDRG4Q9ULP0 352 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 STUB1Q9UNE7 303 aa11.23□□□□□ -0.61
RBFOX1-224ENST00000641259 EPOPA6NHQ4 379 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 FAM220BPB1ANY3 271 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TLR4O00206 839 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 GADD45GO95257 159 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 PTSQ03393 145 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TAF1AQ15573 450 aaPredicted RBP11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 KDM4DQ6B0I6 523 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 RRM2BQ7LG56 351 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 RDH10Q8IZV5 341 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 FAM46DQ8NEK8 389 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 SORCS1Q8WY21 1168 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 RFT1Q96AA3 541 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 GAL3ST1Q99999 423 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TPT1P8Q9HAU6 139 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 FOLH1BQ9HBA9 442 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TRIOO75962 3097 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TRAPPC2P0DI81 140 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TRAPPC2BP0DI82 140 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 KCNJ3P48549 501 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 PTGES3Q15185 160 aaKnown RBP11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TCEAL5Q5H9L2 206 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 RETSATQ6NUM9 610 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 LSRQ86X29 649 aaPredicted RBP11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 APH1BQ8WW43 257 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 NPAS1Q99742 590 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 GORASP2Q9H8Y8 452 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 ASF1AQ9Y294 204 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 PCDHGB1Q9Y5G3 927 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 MN1Q10571 1320 aaPredicted RBP11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 H3BSH0 61 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms