RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 NPSR1Q6W5P4 371 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 TMEM64Q6YI46 380 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 GK5Q6ZS86 529 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 PTRH1Q86Y79 214 aaKnown RBP12.21□□□□□ -0.45
GTF3A-209ENST00000640289 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 VPS37AQ8NEZ2 397 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 PSMA8Q8TAA3 256 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 TM9SF4Q92544 642 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 HAS2Q92819 552 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 GIMAP5Q96F15 307 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 VSTM2LQ96N03 204 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 INPP5KQ9BT40 448 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 NSRP1Q9H0G5 558 aaKnown RBP12.21□□□□□ -0.45
GTF3A-209ENST00000640289 NXF5Q9H1B4 397 aaKnown RBP12.21□□□□□ -0.45
GTF3A-209ENST00000640289 EQTNQ9NQ60 294 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 ZCCHC3Q9NUD5 404 aaKnown RBP12.21□□□□□ -0.45
GTF3A-209ENST00000640289 FAM120CQ9NX05 1096 aaKnown RBP12.21□□□□□ -0.45
GTF3A-209ENST00000640289 TAS2R9Q9NYW1 312 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 ABI3Q9P2A4 366 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 PRODH2Q9UF12 536 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 BTNL2Q9UIR0 455 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 ADAM21Q9UKJ8 722 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 CFL2Q9Y281 166 aa12.21□□□□□ -0.45
GTF3A-209ENST00000640289 YARS2Q9Y2Z4 477 aaKnown RBP12.21□□□□□ -0.45
GTF3A-209ENST00000640289 DYTNA2CJ06 578 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 OR5H15A6NDH6 313 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 SNX3O60493 162 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 DPM1O60762 260 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 ERN1O75460 977 aaKnown RBP12.2□□□□□ -0.46
GTF3A-209ENST00000640289 OR6B1O95007 311 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 IFI6P09912 130 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 SFTPCP11686 197 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 CAPN3P20807 821 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 CDKN2CP42773 168 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 CCT3P49368 545 aaKnown RBP12.2□□□□□ -0.46
GTF3A-209ENST00000640289 CORO7P57737 925 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 KCNK10P57789 538 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 IRX1P78414 480 aaPredicted RBP12.2□□□□□ -0.46
GTF3A-209ENST00000640289 PSG6Q00889 435 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 OC90Q02509 493 aaPredicted RBP12.2□□□□□ -0.46
GTF3A-209ENST00000640289 RCAN2Q14206 197 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 SPDYE7PQ495Y7 208 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 VPS26BQ4G0F5 336 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 SPINK14Q6IE38 97 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 BLOC1S3Q6QNY0 202 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 LYPD8Q6UX82 237 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 IL20RBQ6UXL0 311 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 PRR22Q8IZ63 422 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 TMEM156Q8N614 296 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 CPSF7Q8N684 471 aaKnown RBP12.2□□□□□ -0.46
GTF3A-209ENST00000640289 FBXO30Q8TB52 745 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 TP53INP1Q96A56 240 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 C16orf58Q96GQ5 468 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 LCORQ96JN0 433 aaPredicted RBP12.2□□□□□ -0.46
GTF3A-209ENST00000640289 CCDC115Q96NT0 180 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 SIGLEC12Q96PQ1 595 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 UTP23Q9BRU9 249 aaKnown RBP12.2□□□□□ -0.46
GTF3A-209ENST00000640289 YIPF4Q9BSR8 244 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 RNF32Q9H0A6 362 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 C3orf14Q9HBI5 128 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 NEUROD4Q9HD90 331 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 SLC52A3Q9NQ40 469 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 SERHLQ9NQF3 203 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 NTMQ9P121 344 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 LUZP4Q9P127 313 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 PCDHGB4Q9UN71 923 aa12.2□□□□□ -0.46
GTF3A-209ENST00000640289 GPR55Q9Y2T6 319 aaPredicted RBP12.2□□□□□ -0.46
GTF3A-209ENST00000640289 EPG5Q9HCE0 2579 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 ASPDHA6ND91 283 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 CCDC154A6NI56 674 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 C1QCP02747 245 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 PRB1P04280 392 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 GSNP06396 782 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 CT45A8P0DMV1 189 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 CT45A9P0DMV2 189 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 TRHRP34981 398 aaPredicted RBP12.19□□□□□ -0.46
GTF3A-209ENST00000640289 PPICP45877 212 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 CYB561P49447 251 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 HLCSP50747 726 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 PRR5P85299 388 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 GAB1Q13480 694 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 TP53BP2Q13625 1128 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 OR1C1Q15619 314 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 CT45A2Q5DJT8 189 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 SLC2A7Q6PXP3 512 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 DNAJC14Q6Y2X3 702 aaPredicted RBP12.19□□□□□ -0.46
GTF3A-209ENST00000640289 Q6ZS92 163 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 ZNF227Q86WZ6 799 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 SLC44A2Q8IWA5 706 aaPredicted RBP12.19□□□□□ -0.46
GTF3A-209ENST00000640289 C17orf47Q8NEP4 570 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 OR4N2Q8NGD1 307 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 GOT1L1Q8NHS2 421 aaPredicted RBP12.19□□□□□ -0.46
GTF3A-209ENST00000640289 SLC22A8Q8TCC7 542 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 ASB15Q8WXK1 588 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 SPDL1Q96EA4 605 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 OTUB1Q96FW1 271 aaPredicted RBP12.19□□□□□ -0.46
GTF3A-209ENST00000640289 MS4A4EQ96PG1 132 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 BTBD9Q96Q07 612 aa12.19□□□□□ -0.46
GTF3A-209ENST00000640289 PANX1Q96RD7 426 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms