RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 PRDM7Q9NQW5 492 aa18.74■□□□□ 0.59
CLN8-208ENST00000635751 FGF21Q9NSA1 209 aa18.74■□□□□ 0.59
CLN8-208ENST00000635751 PCDHGB3Q9Y5G1 929 aa18.74■□□□□ 0.59
CLN8-208ENST00000635751 KNTC1P50748 2209 aa18.74■□□□□ 0.59
CLN8-208ENST00000635751 SMIM10L1P0DMW3 83 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 ITIH1P19827 911 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 CHI3L1P36222 383 aaPredicted RBP18.73■□□□□ 0.59
CLN8-208ENST00000635751 PRIM2P49643 509 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 SCARB2Q14108 478 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 PRTGQ2VWP7 1150 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 TCTE1Q5JU00 501 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 DHRS13Q6UX07 377 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 SRFBP1Q8NEF9 429 aaKnown RBP18.73■□□□□ 0.59
CLN8-208ENST00000635751 ZNF501Q96CX3 271 aaPredicted RBP18.73■□□□□ 0.59
CLN8-208ENST00000635751 SMIM10Q96HG1 83 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 KCNC2Q96PR1 638 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 TEFMQ96QE5 360 aaKnown RBP18.73■□□□□ 0.59
CLN8-208ENST00000635751 MIEF1Q9NQG6 463 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 PAK1IP1Q9NWT1 392 aaPredicted RBP18.73■□□□□ 0.59
CLN8-208ENST00000635751 NDRG4Q9ULP0 352 aaKnown RBP18.73■□□□□ 0.59
CLN8-208ENST00000635751 CEP250Q9BV73 2442 aa18.73■□□□□ 0.59
CLN8-208ENST00000635751 A0A1W2PRB8 838 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 TMEM229AB2RXF0 380 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 PTGES3LE9PB15 166 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 OR2B3O76000 313 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 KRT75O95678 551 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 MSL3P1P0C860 447 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 TPP2P29144 1249 aaPredicted RBP18.72■□□□□ 0.59
CLN8-208ENST00000635751 CSTF2P33240 577 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLN8-208ENST00000635751 SSR2P43308 183 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 CXCR4P61073 352 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 PIGFQ07326 219 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 FGD3Q5JSP0 725 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 ZNF793Q6ZN11 406 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 CCDC80Q76M96 950 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 ABHD13Q7L211 337 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 PAGE2Q7Z2X7 111 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 NUDT13Q86X67 352 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 OR8K5Q8NH50 307 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 SPPL2AQ8TCT8 520 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 LZICQ8WZA0 190 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 OR6C1Q96RD1 312 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 GPN2Q9H9Y4 310 aaPredicted RBP18.72■□□□□ 0.59
CLN8-208ENST00000635751 OCIAD1Q9NX40 245 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 TPRKBQ9Y3C4 175 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 PCDHGB1Q9Y5G3 927 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 SPAARA0A1B0GVQ0 90 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 H3BMH7 237 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 TM4SF5O14894 197 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 ADAMDEC1O15204 470 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 RRM2P31350 389 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 BTN3A2P78410 334 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 ACY1Q03154 408 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 TGM3Q08188 693 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 NFATC3Q12968 1075 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 ZNF630Q2M218 657 aaPredicted RBP18.72■□□□□ 0.59
CLN8-208ENST00000635751 IFI44LQ53G44 452 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 TSPYL5Q86VY4 417 aaPredicted RBP18.72■□□□□ 0.59
CLN8-208ENST00000635751 ZC3H7AQ8IWR0 971 aaKnown RBP18.72■□□□□ 0.59
CLN8-208ENST00000635751 ARHGEF39Q8N4T4 335 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 NFKBIDQ8NI38 313 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 ZNF347Q96SE7 839 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 DDX31Q9H8H2 851 aaKnown RBP18.72■□□□□ 0.59
CLN8-208ENST00000635751 SCN3BQ9NY72 215 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 SERTAD3Q9UJW9 196 aa18.72■□□□□ 0.59
CLN8-208ENST00000635751 HYKKA2RU49 373 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 ALOX12P18054 663 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 CSRP1P21291 193 aaKnown RBP18.71■□□□□ 0.59
CLN8-208ENST00000635751 PCMT1P22061 227 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 CCKBRP32239 447 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 SOAT1P35610 550 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 STT3AP46977 705 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 ARFIP1P53367 373 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 CASP9P55211 416 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 DEFB134Q4QY38 66 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 CDCP2Q5VXM1 449 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 PRSS41Q7RTY9 318 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 RNF130Q86XS8 419 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 ACOT4Q8N9L9 421 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 AGBL5Q8NDL9 886 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 PITX2Q99697 317 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 CCDC90BQ9GZT6 254 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 PLGRKTQ9HBL7 147 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 SIDT1Q9NXL6 827 aaKnown RBP18.71■□□□□ 0.59
CLN8-208ENST00000635751 ACSL6Q9UKU0 697 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 WBP11Q9Y2W2 641 aaKnown RBP18.71■□□□□ 0.59
CLN8-208ENST00000635751 SLC22A7Q9Y694 548 aa18.71■□□□□ 0.59
CLN8-208ENST00000635751 FER1L5A0AVI2 2057 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 FITM1A5D6W6 292 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 EFCAB7A8K855 629 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 TMX2-CTNND1H3BSU7 103 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 HYAL3O43820 417 aaPredicted RBP18.7■□□□□ 0.58
CLN8-208ENST00000635751 XPNPEP2O43895 674 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 MED26O95402 600 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 IFNA14P01570 189 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 HIST1H1TP22492 207 aaPredicted RBP18.7■□□□□ 0.58
CLN8-208ENST00000635751 ATP5A1P25705 553 aaKnown RBP18.7■□□□□ 0.58
CLN8-208ENST00000635751 CERS1P27544 350 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 EMP3P54852 163 aa18.7■□□□□ 0.58
CLN8-208ENST00000635751 NPRL3Q12980 569 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms