RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TM9SF1O15321 606 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 BIRC5O15392 142 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 RGS16O15492 202 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 TRIM3O75382 744 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 PPM1BO75688 479 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 WISP2O76076 250 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 BPGMP07738 259 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 ESRRAP11474 423 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 DDX5P17844 614 aaKnown RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 EMDP50402 254 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 KCNJ2P63252 427 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 UGT3A2Q3SY77 523 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 ARL13AQ5H913 290 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 FAM111BQ6SJ93 734 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 Q6ZSR9 355 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 TRILQ7L0X0 811 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 NUP54Q7Z3B4 507 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 FGD2Q7Z6J4 655 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 DOLPP1Q86YN1 238 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 FAM9CQ8IZT9 166 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 MMP21Q8N119 569 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 FAM13CQ8NE31 585 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 OR10G3Q8NGC4 313 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 OR52N2Q8NGI0 321 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 SPPL2AQ8TCT8 520 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 ITLN2Q8WWU7 325 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 PGM2Q96G03 612 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 DMRTA2Q96SC8 542 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 ANGPTL4Q9BY76 406 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 TP63Q9H3D4 680 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 ZNF703Q9H7S9 590 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 LRTM1Q9HBL6 345 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 PROK2Q9HC23 129 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 MIEF1Q9NQG6 463 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 PFDN4Q9NQP4 134 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 TAS2R9Q9NYW1 312 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 SLC17A7Q9P2U7 560 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 TINAGQ9UJW2 476 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 GPR55Q9Y2T6 319 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-217ENST00000624009 TRAF6Q9Y4K3 522 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 CCDC168Q8NDH2 2452 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 DOCK7Q96N67 2140 aa11.44□□□□□ -0.58
LINC00963-217ENST00000624009 A0A1B0GTH9 108 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 LSM1O15116 133 aaKnown RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 CTIFO43310 598 aaKnown RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 COQ9O75208 318 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 SEC22BO75396 215 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 ABCB1P08183 1280 aaPredicted RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 HOXD4P09016 255 aaPredicted RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 ELAVL4P26378 380 aaKnown RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 ASMTP46597 345 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 DUSP2Q05923 314 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 BTKQ06187 659 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 C2orf80Q0P641 193 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 DUSP8Q13202 625 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 SLC10A1Q14973 349 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 TRMT12Q53H54 448 aaKnown RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 CLEC6AQ6EIG7 209 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 TMEM211Q6ICI0 200 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 LRIG3Q6UXM1 1119 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 PACS2Q86VP3 889 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 CCDC116Q8IYX3 515 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 TMEM251Q8N6I4 163 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 OR52R1Q8NGF1 315 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 DIO2Q92813 273 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 EXOSC8Q96B26 276 aaKnown RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 MTERF3Q96E29 417 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 DTNBP1Q96EV8 351 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 TMEM41AQ96HV5 264 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 ZNF597Q96LX8 424 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 PPP3R2Q96LZ3 170 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 VSTM2LQ96N03 204 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 BBS4Q96RK4 519 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 DOHHQ9BU89 302 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 EBPLQ9BY08 206 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 ITPAQ9BY32 194 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 NXF5Q9H1B4 397 aaKnown RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 CHST11Q9NPF2 352 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 TUBA8Q9NY65 449 aaPredicted RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 BCAP29Q9UHQ4 241 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 DTX4Q9Y2E6 619 aa11.43□□□□□ -0.58
LINC00963-217ENST00000624009 V9GYY5 206 aaPredicted RBP11.43□□□□□ -0.58
LINC00963-217ENST00000624009 HCFC1P51610 2035 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 PCNX3Q9H6A9 2034 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 OR6C70A6NIJ9 312 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 LRRC3CA6NJW4 275 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 ADAM10O14672 748 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 SPAG7O75391 227 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 PSMG1O95456 288 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 DHRS4L1P0CG22 281 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 PCSK2P16519 638 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 MAPK1P28482 360 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 NTSP30990 170 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 PIGAP37287 484 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 RFC3P40938 356 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 CASP3P42574 277 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 MAGEA5P43359 124 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 DNASE1L1P49184 302 aa11.42□□□□□ -0.58
LINC00963-217ENST00000624009 MRPS22P82650 360 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms