RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TMEM91Q6ZNR0 172 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 PLEKHM3Q6ZWE6 761 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 SLC24A5Q71RS6 500 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 HDDC2Q7Z4H3 204 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 KLHDC8AQ8IYD2 350 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 DTX3Q8N9I9 347 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 TOR1AIP2Q8NFQ8 470 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 OR4K5Q8NGD3 323 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 RAB8BQ92930 207 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CHFRQ96EP1 664 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 PLA2G12AQ9BZM1 189 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 NUDT15Q9NV35 164 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CUEDC1Q9NWM3 386 aaPredicted RBP13.33□□□□□ -0.28
LDB3-209ENST00000623056 PTTG3PQ9NZH4 202 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 TAAR2Q9P1P5 351 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 DOCK6Q96HP0 2047 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 ANKDD1BA6NHY2 528 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 TMEM88BA6NKF7 163 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 IFNA7P01567 189 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 CELP19835 753 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 DDCP20711 480 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 SLC1A3P43003 542 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 GALEQ14376 348 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 BRAT1Q6PJG6 821 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 PRSS55Q6UWB4 352 aaPredicted RBP13.32□□□□□ -0.28
LDB3-209ENST00000623056 C16orf62Q7Z3J2 963 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 LUZP2Q86TE4 346 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 IQCHQ86VS3 1027 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 VOPP1Q96AW1 172 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 C11orf49Q9H6J7 331 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 DMRT3Q9NQL9 472 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 SH2B3Q9UQQ2 575 aa13.32□□□□□ -0.28
LDB3-209ENST00000623056 OR2AG2A6NM03 316 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 DVL2O14641 736 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 ADAM12O43184 909 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 MPC2O95563 127 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SSTR2P30874 369 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SLC6A11P48066 632 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 PREPP48147 710 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SPINT3P49223 89 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 ACLYP53396 1101 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SLBPQ14493 270 aaKnown RBP eCLIP13.31□□□□□ -0.28
LDB3-209ENST00000623056 NTRK2Q16620 822 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 NDUFA9Q16795 377 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SPDYE7PQ495Y7 208 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 ARHGAP15Q53QZ3 475 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 CD276Q5ZPR3 534 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 ADGRD2Q7Z7M1 963 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 COMTD1Q86VU5 262 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 C2orf15Q8WU43 125 aaKnown RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 OVCA2Q8WZ82 227 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SMG7Q92540 1137 aaKnown RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 NEURL3Q96EH8 262 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 UBL7Q96S82 380 aaPredicted RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 OR51J1Q9H342 316 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 EGLN3Q9H6Z9 239 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 MIEF1Q9NQG6 463 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 ENAMQ9NRM1 1142 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 IMP3Q9NV31 184 aaKnown RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 MARCH5Q9NX47 278 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 TRPM5Q9NZQ8 1165 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SRRDQ9UH36 339 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 CACNG2Q9Y698 323 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 FRMPD3Q5JV73 1810 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 A0A1W2PRQ8 180 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 ANHXE9PGG2 379 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 M0R3H8 397 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 FOXE1O00358 373 aaPredicted RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 ZNF197O14709 1029 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 BNIP3LO60238 219 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 RRASP10301 218 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 ZNF81P51508 661 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 PNLIPRP1P54315 467 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 TAP2Q03519 686 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 ZNF155Q12901 538 aaPredicted RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 LGALSLQ3ZCW2 172 aaPredicted RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 IDNKQ5T6J7 187 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 FAM122CQ6P4D5 195 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 NR2C2APQ86WQ0 139 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 MEX3DQ86XN8 651 aaKnown RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 LILRA3Q8N6C8 439 aaPredicted RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 OR2AP1Q8NGE2 309 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 ACOT12Q8WYK0 555 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 KCNN2Q9H2S1 579 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 CLEC4MQ9H2X3 399 aaPredicted RBP13.31□□□□□ -0.28
LDB3-209ENST00000623056 CYSLTR2Q9NS75 346 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 MAN2C1Q9NTJ4 1040 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SEC14L3Q9UDX4 400 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 UBQLN2Q9UHD9 624 aa13.31□□□□□ -0.28
LDB3-209ENST00000623056 SEPT4O43236 478 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 EEF1E1O43324 174 aaKnown RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 CATP04040 527 aaKnown RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 ASGR1P07306 291 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 ETV3P41162 512 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 EPHA5P54756 1037 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms