RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZNF597Q96LX8 424 aa8.55□□□□□ -1.04
HDAC9-229ENST00000622668 GPATCH1Q9BRR8 931 aaKnown RBP8.55□□□□□ -1.04
HDAC9-229ENST00000622668 ACTRT3Q9BYD9 372 aa8.55□□□□□ -1.04
HDAC9-229ENST00000622668 BRF2Q9HAW0 419 aa8.55□□□□□ -1.04
HDAC9-229ENST00000622668 TEX51A0A1B0GUA7 166 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 A0A1W2PP18 115 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 TSPAN11A1L157 253 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 GABRR3A8MPY1 467 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 EIF1AYO14602 144 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 CEACAM1P13688 526 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 MAN2A2P49641 1150 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 FOXA1P55317 472 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 PPP1CAP62136 330 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 EEF1A1P68104 462 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ST3GAL3Q11203 375 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 TGIF1Q15583 401 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 CRB2Q5IJ48 1285 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 HMBOX1Q6NT76 420 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 GFRALQ6UXV0 394 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 HPS6Q86YV9 775 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 DHRSXQ8N5I4 330 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 LRRC58Q96CX6 371 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 HOXD1Q9GZZ0 328 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 P2RY12Q9H244 342 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 CTSFQ9UBX1 484 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 IFT52Q9Y366 437 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SULT2B1O00204 365 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SCAMP2O15127 329 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF821O75541 412 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 TEAD1P28347 426 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SSTR4P31391 388 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 NUBP1P53384 320 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 CLDN8P56748 225 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 REEP5Q00765 189 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 TNFRSF17Q02223 184 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SGCAQ16586 387 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ABHD17CQ6PCB6 329 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 BMP8AQ7Z5Y6 402 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 GALNT5Q7Z7M9 940 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 LIX1LQ8IVB5 337 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SLC30A8Q8IWU4 369 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SETD9Q8NE22 299 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 NTMT1Q9BV86 223 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ACPTQ9BZG2 426 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SLC6A16Q9GZN6 736 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 LRMDAQ9H2I8 198 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 IL1RAPQ9NPH3 570 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 PLA2G3Q9NZ20 509 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 MYO18BQ8IUG5 2567 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 A0A1W2PRG6 482 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 NSA2O95478 260 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 RPS17P08708 135 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 PPP1R8Q12972 351 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 MEP1AQ16819 746 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 RABL3Q5HYI8 236 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 FRMPD2BQ6IN97 320 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 PWWP2BQ6NUJ5 590 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ZFP1Q6P2D0 407 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 AAGABQ6PD74 315 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 CPEB2Q7Z5Q1 589 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SPNS2Q8IVW8 549 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ALDH16A1Q8IZ83 802 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 OR2A1Q8NGT9 310 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 DUSP19Q8WTR2 217 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 C10orf82Q8WW14 230 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ROPN1LQ96C74 230 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 VWCEQ96DN2 955 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 GPER1Q99527 375 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 APMAPQ9HDC9 416 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 PRPF19Q9UMS4 504 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SHROOM3Q8TF72 1996 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ENTPD5O75356 428 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 EEDO75530 441 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 TIPRLO75663 272 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 WNT1P04628 370 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 IL32P24001 234 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 SLC9A3P48764 834 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 HSD17B7P56937 341 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 DLG1Q12959 904 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 MYBPHQ13203 477 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ZCCHC12Q6PEW1 402 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 THAP5Q7Z6K1 395 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 MVB12AQ96EY5 273 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 WDR83Q9BRX9 315 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 MS4A8Q9BY19 250 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 POLR2J3Q9H1A7 115 aaKnown RBP8.54□□□□□ -1.04
HDAC9-229ENST00000622668 OR10A5Q9H207 317 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 LHX9Q9NQ69 397 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF446Q9NWS9 450 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 ATG4BQ9Y4P1 393 aa8.54□□□□□ -1.04
HDAC9-229ENST00000622668 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 CCNB2O95067 398 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ETFAP13804 333 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF43P17038 809 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 FASLGP48023 281 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 CWF19L1Q69YN2 538 aaKnown RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 DNM1P34Q6PK57 102 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ATG14Q6ZNE5 492 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 PTCHD4Q6ZW05 846 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms