RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 DXOO77932 396 aaKnown RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 PSMG1O95456 288 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 NUDT7P0C024 238 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 PRIM2P49643 509 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 ANXA11P50995 505 aaKnown RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 DSTNP60981 165 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 RPS18P62269 152 aaKnown RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 DUSP8Q13202 625 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 MFSD12Q6NUT3 480 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 CPEB2Q7Z5Q1 589 aaKnown RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 OR5D16Q8NGK9 328 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 SLC2A12Q8TD20 617 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 C8orf44Q96CB5 159 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 OTUB1Q96FW1 271 aaPredicted RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 REXO5Q96IC2 774 aaKnown RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 FBXL20Q96IG2 436 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 ART5Q96L15 291 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 SPATA9Q9BWV2 254 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 ACTRT3Q9BYD9 372 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 EGFL7Q9UHF1 273 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 GSTA4O15217 222 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 PRAMEF2O60811 474 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 TNFRSF21O75509 655 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 DDAH2O95865 285 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 HTR1EP28566 365 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 MAGEA8P43361 318 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 EEF1A2Q05639 463 aaKnown RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 ZNF155Q12901 538 aaPredicted RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 BNIP2Q12982 314 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 TRIM25Q14258 630 aaKnown RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 PUM1Q14671 1186 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 RTP5Q14D33 572 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 C1orf146Q5VVC0 180 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 WDR53Q7Z5U6 358 aaPredicted RBP16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 ZZZ3Q8IYH5 903 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 MICU2Q8IYU8 434 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 IL22RA1Q8N6P7 574 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 TNIP2Q8NFZ5 429 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 OR7G1Q8NGA0 311 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 MIPOL1Q8TD10 442 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 RAB8BQ92930 207 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 NKD1Q969G9 470 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 FAM122AQ96E09 287 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 GPR87Q9BY21 358 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 PCDHAC1Q9H158 963 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 OR10A5Q9H207 317 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 KLK13Q9UKR3 277 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 POMPQ9Y244 141 aa16.59■□□□□ 0.25
PTCHD3-202ENST00000622555 LOC101059948A0A1B0GTJ6 334 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 ELOVL7A1L3X0 281 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 SAGE2PA6NJ88 616 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 HMGN4O00479 90 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 IGHEP01854 428 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 OR12D1P0DN82 309 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 MS4A2Q01362 244 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 ADRM1Q16186 407 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 ERICH5Q6P6B1 374 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 PAPD4Q6PIY7 484 aaKnown RBP16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 PTOV1Q86YD1 416 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 ZNF321PQ8N8H1 164 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 MORN4Q8NDC4 146 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 ZNF721Q8TF20 911 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC9A6Q92581 669 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 MAL2Q969L2 176 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 NXPE2Q96DL1 559 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 ASB9Q96DX5 294 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 OR7D2Q96RA2 312 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 LPAR4Q99677 370 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 C15orf41Q9Y2V0 281 aa16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 HEMK1Q9Y5R4 338 aaPredicted RBP16.58■□□□□ 0.24
PTCHD3-202ENST00000622555 TRABD2BA6NFA1 517 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 TERTO14746 1132 aaKnown RBP16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 PCDH17O14917 1159 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 KRT36O76013 467 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 SEC24DO94855 1032 aaPredicted RBP16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 CLPSP04118 112 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 BMP2P12643 396 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 EMDP50402 254 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 TXNL4AP83876 142 aaKnown RBP16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 VMACQ2NL98 169 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 CDC73Q6P1J9 531 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 RNF111Q6ZNA4 994 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 LGI4Q8N135 537 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 ZNF615Q8N8J6 731 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 CDRT4Q8N9R6 151 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 C11orf65Q8NCR3 313 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 ADAMTS15Q8TE58 950 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 XAGE5Q8WWM1 108 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 FOLH1BQ9HBA9 442 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 THUMPD1Q9NXG2 353 aaKnown RBP16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 STX18Q9P2W9 335 aaKnown RBP16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 COPS7AQ9UBW8 275 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 HS3ST3B1Q9Y662 390 aa16.57■□□□□ 0.24
PTCHD3-202ENST00000622555 LOC102723996A0A087X1L8 192 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 STAMBPO95630 424 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 IGKV3-11P04433 115 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 ACP2P11117 423 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 NCK1P16333 377 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 F8A1P23610 371 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 MMP11P24347 488 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms