RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 SOX17Q9H6I2 414 aaPredicted RBP6.96□□□□□ -1.29
VPS45-213ENST00000618148 THSD1Q9NS62 852 aa6.96□□□□□ -1.29
VPS45-213ENST00000618148 DDX18Q9NVP1 670 aaKnown RBP6.96□□□□□ -1.29
VPS45-213ENST00000618148 THUMPD1Q9NXG2 353 aaKnown RBP6.96□□□□□ -1.29
VPS45-213ENST00000618148 GIN1Q9NXP7 522 aa6.96□□□□□ -1.29
VPS45-213ENST00000618148 SLC7A8Q9UHI5 535 aa6.96□□□□□ -1.29
VPS45-213ENST00000618148 GPN3Q9UHW5 284 aaPredicted RBP6.96□□□□□ -1.29
VPS45-213ENST00000618148 TCFL5Q9UL49 500 aa6.96□□□□□ -1.29
VPS45-213ENST00000618148 L3MBTL1Q9Y468 752 aa6.96□□□□□ -1.29
VPS45-213ENST00000618148 SNX8Q9Y5X2 465 aa6.96□□□□□ -1.29
VPS45-213ENST00000618148 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.96□□□□□ -1.29
VPS45-213ENST00000618148 SCN2AQ99250 2005 aa6.96□□□□□ -1.29
VPS45-213ENST00000618148 SAGE2PA6NJ88 616 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 TTC36A6NLP5 189 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 C17orf105B2RV13 164 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 HRKO00198 91 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 ACOT8O14734 319 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 BRINP1O60477 761 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 IGHEP01854 428 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 HMGN2P05204 90 aaKnown RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 HEXBP07686 556 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 ME2P23368 584 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 MMP11P24347 488 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 SOAT1P35610 550 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 CHI3L1P36222 383 aaPredicted RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 EMDP50402 254 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 SLC37A1P57057 533 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 RBBP4Q09028 425 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 BNIP2Q12982 314 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 SPDYE7PQ495Y7 208 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 COX20Q5RI15 118 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS45-213ENST00000618148 MFSD4BQ5TF39 518 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 CDC73Q6P1J9 531 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 SHISA6Q6ZSJ9 500 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 CPEB2Q7Z5Q1 589 aaKnown RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 RNF130Q86XS8 419 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 HPS6Q86YV9 775 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 PRSS58Q8IYP2 241 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 SIMC1Q8NDZ2 872 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 NUP43Q8NFH3 380 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 OR52E4Q8NGH9 312 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 OR10A6Q8NH74 314 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 ZNF721Q8TF20 911 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 METTL21AQ8WXB1 218 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 DAZLQ92904 295 aaKnown RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 NKD1Q969G9 470 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 ASB9Q96DX5 294 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 CLPTM1LQ96KA5 538 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 ART5Q96L15 291 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 RAB3IPQ96QF0 476 aaPredicted RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 ECSITQ9BQ95 431 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 LMF2Q9BU23 707 aaKnown RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 THUMPD3Q9BV44 507 aaKnown RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 ACTRT3Q9BYD9 372 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 A4GALTQ9NPC4 353 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 DUSP22Q9NRW4 184 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 ADA2Q9NZK5 511 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 C19orf25Q9UFG5 118 aaPredicted RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 FARSAQ9Y285 508 aaKnown RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 PTRH2Q9Y3E5 179 aaKnown RBP6.96□□□□□ -1.3
VPS45-213ENST00000618148 ZNF451Q9Y4E5 1061 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 HS3ST3B1Q9Y662 390 aa6.96□□□□□ -1.3
VPS45-213ENST00000618148 LOC101059948A0A1B0GTJ6 334 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 MYOCOSA0A1B0GUC4 107 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 HMGN4O00479 90 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 SOCS6O14544 535 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 DYRK3O43781 588 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 PRAMEF2O60811 474 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 PDE5AO76074 875 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 NKX2-2O95096 273 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 IFNA16P05015 189 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 GUSBP08236 651 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 ARAFP10398 606 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 LIPCP11150 499 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 ETFAP13804 333 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 TCN2P20062 427 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 F8A1P23610 371 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 SSTR4P31391 388 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 PCGF2P35227 344 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 FOLR3P41439 243 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 KHKP50053 298 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 MMP16P51512 607 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 OR4D2P58180 307 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 TRAP1Q12931 704 aaKnown RBP6.95□□□□□ -1.3
VPS45-213ENST00000618148 TP53BP2Q13625 1128 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 VEZF1Q14119 521 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 TRIM25Q14258 630 aaKnown RBP6.95□□□□□ -1.3
VPS45-213ENST00000618148 ZNF267Q14586 743 aaPredicted RBP6.95□□□□□ -1.3
VPS45-213ENST00000618148 SSPNQ14714 243 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 LASP1Q14847 261 aaKnown RBP6.95□□□□□ -1.3
VPS45-213ENST00000618148 MYBPC3Q14896 1274 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 PCOLCEQ15113 449 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 MAPK11Q15759 364 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 TBC1D25Q3MII6 688 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 SFT2D3Q587I9 215 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 PRAMEF8Q5VWM4 474 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 PRAMEF7Q5VXH5 474 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 HEPHL1Q6MZM0 1159 aa6.95□□□□□ -1.3
VPS45-213ENST00000618148 ERICH5Q6P6B1 374 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms