RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	ZNRF1	Q8ND25	227 aa		4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	DLX4	Q92988	240 aa	Predicted RBP	4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	NABP1	Q96AH0	204 aa		4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	CASD1	Q96PB1	797 aa		4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	APOO	Q9BUR5	198 aa		4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	POLR1E	Q9GZS1	481 aa	Known RBP	4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	TSPY26P	Q9H489	355 aa		4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	RDH8	Q9NYR8	311 aa		4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	EMCN	Q9ULC0	261 aa		4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	SNX6	Q9UNH7	406 aa		4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
PVT1-225	ENST00000617087	NACAD	O15069	1562 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	NPIPA5	A0A0B4J1W7	369 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	CLRN2	A0PK11	232 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	NPIPA5	E9PKD4	350 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	EI24	O14681	340 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	TFEC	O14948	347 aa	Predicted RBP	4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	XPO1	O14980	1071 aa	Known RBP	4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	ZNF749	O43361	778 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	FRAT2	O75474	233 aa	Predicted RBP	4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	ZNF821	O75541	412 aa	Predicted RBP	4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	RFC2	P35250	354 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	CYLC1	P35663	651 aa	Predicted RBP	4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	DLST	P36957	453 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	HTR5A	P47898	357 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	GBX2	P52951	348 aa	Predicted RBP	4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	MOGAT2	Q3SYC2	334 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	ATAD3B	Q5T9A4	648 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	RUSC1-AS1	Q66K80	236 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	USP43	Q70EL4	1123 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	CENPU	Q71F23	418 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	LUZP1	Q86V48	1076 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	EFCAB13	Q8IY85	973 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	CENPS	Q8N2Z9	138 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	ZNF781	Q8N8C0	355 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	OR52M1	Q8NGK5	317 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	OR2T6	Q8NHC8	308 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	AGAP4	Q96P64	663 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	C19orf43	Q9BQ61	176 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	TBCD	Q9BTW9	1192 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	RBM4	Q9BWF3	364 aa	Known RBP	4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	GPR174	Q9BXC1	333 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	FAM114A2	Q9NRY5	505 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	DEPP	Q9NTK1	212 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	BARHL2	Q9NY43	387 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	EIF3K	Q9UBQ5	218 aa	Known RBP	4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	LRP12	Q9Y561	859 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	CARMIL1	Q5VZK9	1371 aa		4.61	□□□□□ -1.67
PVT1-225	ENST00000617087	BCLAF3	A2AJT9	711 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	FBLL1	A6NHQ2	334 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	ARHGEF33	A8MVX0	844 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087		K7EQG2	157 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	PDLIM1	O00151	329 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	MPHOSPH10	O00566	681 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	MAGEB3	O15480	346 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	GMFG	O60234	142 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	DUS4L	O95620	317 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	IGHG1	P01857	330 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	ACTR1A	P61163	376 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	NOP14	P78316	857 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	CALCOCO2	Q13137	446 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	ZNF146	Q15072	292 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	SPATA46	Q5T0L3	261 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	LCE1A	Q5T7P2	110 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	CASC1	Q6TDU7	716 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	MOB2	Q70IA6	237 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	NUFIP2	Q7Z417	695 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	VASH2	Q86V25	355 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	CCDC71	Q8IV32	467 aa	Predicted RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	METTL4	Q8N3J2	472 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	ZNF614	Q8N883	585 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	OR1B1	Q8NGR6	318 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	OR2T3	Q8NH03	318 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	SSC4D	Q8WTU2	575 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	HPDL	Q96IR7	371 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	LGMN	Q99538	433 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	ZSCAN5A	Q9BUG6	496 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	KRTAP4-2	Q9BYR5	136 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	KLRF1	Q9NZS2	232 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	GHRL	Q9UBU3	117 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	EXOG	Q9Y2C4	368 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	SLC9A8	Q9Y2E8	581 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	DDX49	Q9Y6V7	483 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	MYO15B	Q96JP2	1530 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	FER1L5	A0AVI2	2057 aa		4.6	□□□□□ -1.67
PVT1-225	ENST00000617087	IGHV4-30-2	A0A087WSY4	118 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087		A0A0J9YVX5	310 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	LRIT2	A6NDA9	550 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	PRR23A	A6NEV1	266 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	RNF212B	A8MTL3	300 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	RANBP6	O60518	1105 aa	Known RBP	4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	SNAP91	O60641	907 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	IGSF6	O95976	241 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	IQCF3	P0C7M6	154 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	ADORA3	P0DMS8	318 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	UQCRB	P14927	111 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	GLRA2	P23416	452 aa		4.59	□□□□□ -1.67
PVT1-225	ENST00000617087	UCP1	P25874	307 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms