RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FAM180AQ6UWF9 173 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 GFRALQ6UXV0 394 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 APOOLQ6UXV4 268 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 RNF111Q6ZNA4 994 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TMEM132CQ8N3T6 1108 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 OR5M1Q8NGP8 315 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 OR14A16Q8NHC5 309 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 RDH11Q8TC12 318 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TMBIM1Q969X1 311 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PSMG3-AS1Q96PY0 264 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TTTY12Q9BZ98 90 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 AKTIPQ9H8T0 292 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SLC6A13Q9NSD5 602 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 LYARQ9NX58 379 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SH3BP4Q9P0V3 963 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ABCA4P78363 2273 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ROS1P08922 2347 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TRGV8A0A0C4DH27 118 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 C1orf226A1L170 272 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CLEC18AA5D8T8 446 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 C19orf84I3L1E1 186 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 GNB5O14775 395 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CTIFO43310 598 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 LDLRP01130 860 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PTGDSP41222 190 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PHEXP78562 749 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF763Q0D2J5 394 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ILF2Q12905 390 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SLC9B1Q4ZJI4 515 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 IL23RQ5VWK5 629 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 GALNT18Q6P9A2 607 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CLEC18BQ6UXF7 455 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SZRD1Q7Z422 152 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ARMC10Q8N2F6 343 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CLEC18CQ8NCF0 446 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 MORN4Q8NDC4 146 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 OR2M7Q8NG81 312 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TM9SF4Q92544 642 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 AMDHD1Q96NU7 426 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ADOQ96SZ5 270 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SLC6A15Q9H2J7 730 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SH2D2AQ9NP31 389 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 MS4A12Q9NXJ0 267 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ADGRE2Q9UHX3 823 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TEKT2Q9UIF3 430 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CENPVL1A0A0U1RR11 272 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 CCDC151A5D8V7 595 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ASPDHA6ND91 283 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 NPIPA2E9PIF3 369 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 NPIPA3F8WFD2 350 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ABCB7O75027 752 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 HSPA4LO95757 839 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 OPN1LWP04000 364 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ATP1B1P05026 303 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ENO1P06733 434 aaKnown RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 DDCP20711 480 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 IL12AP29459 219 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 AGFG1P52594 562 aaKnown RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ABCE1P61221 599 aaKnown RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SERTAD2Q14140 314 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 PIGGQ5H8A4 983 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 FAM47EQ6ZV65 393 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 LRRC25Q8N386 305 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 RIBC1Q8N443 379 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 TMEM251Q8N6I4 163 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 BCORP1Q8N888 145 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 OR9I1Q8NGQ6 314 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 TUBGCP3Q96CW5 907 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ROGDIQ9GZN7 287 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 C1orf109Q9NX04 203 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 FBXL2Q9UKC9 423 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 YARS2Q9Y2Z4 477 aaKnown RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SLC6A5Q9Y345 797 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ASNA1O43681 348 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SLC19A2O60779 497 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 PRF1P14222 555 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 H2AFXP16104 143 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF24P17028 368 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 TRHRP34981 398 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 DGKQP52824 942 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ADORA2A-AS1P86434 159 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 CLYBLQ8N0X4 340 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 GATSQ8NAP1 163 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 FNDC5Q8NAU1 212 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 GALNT11Q8NCW6 608 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ADAMTS18Q8TE60 1221 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SLC9A6Q92581 669 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 DNAJA3Q96EY1 480 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 PGM2Q96G03 612 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 OR52B2Q96RD2 323 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 EBF4Q9BQW3 602 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 TRIM8Q9BZR9 551 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 PNPLA3Q9NST1 481 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 PSD3Q9NYI0 1048 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SPRR3Q9UBC9 169 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 COPS7AQ9UBW8 275 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SEC14L3Q9UDX4 400 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ADAM29Q9UKF5 820 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 MAPRE3Q9UPY8 281 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SPACA6W5XKT8 324 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms