RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RGNQ15493 299 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 LTB4RQ15722 352 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 NKG7Q16617 165 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 PRICKLE4Q2TBC4 344 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 SPDYE7PQ495Y7 208 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 FHL5Q5TD97 284 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 C6orf163Q5TEZ5 329 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 MRPL14Q6P1L8 145 aaKnown RBP10.67□□□□□ -0.7
SLIRP-212ENST00000613856 FAM198BQ6UWH4 519 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 TMEM107Q6UX40 140 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 OR2L13Q8N349 312 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 PLPP5Q8NEB5 264 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 TNIP2Q8NFZ5 429 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 OR10A6Q8NH74 314 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 OR5AK3PQ8NH89 298 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 STT3BQ8TCJ2 826 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 MIPOL1Q8TD10 442 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 CTHRC1Q96CG8 243 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 CCDC124Q96CT7 223 aaKnown RBP10.67□□□□□ -0.7
SLIRP-212ENST00000613856 REXO5Q96IC2 774 aaKnown RBP10.67□□□□□ -0.7
SLIRP-212ENST00000613856 ZNF583Q96ND8 569 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 DGAT2Q96PD7 388 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 MS4A4EQ96PG1 132 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 KCTD14Q9BQ13 255 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-212ENST00000613856 YIPF2Q9BWQ6 316 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 ALOXE3Q9BYJ1 711 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 SPRY4Q9C004 299 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 VN1R1Q9GZP7 353 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 CXorf21Q9HAI6 301 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 C3orf14Q9HBI5 128 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 NECTIN3Q9NQS3 549 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 ZNF71Q9NQZ8 489 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-212ENST00000613856 ZCCHC3Q9NUD5 404 aaKnown RBP10.67□□□□□ -0.7
SLIRP-212ENST00000613856 GPATCH2Q9NW75 528 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 MAT2BQ9NZL9 334 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 IFT80Q9P2H3 777 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-212ENST00000613856 POMPQ9Y244 141 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 SNX8Q9Y5X2 465 aa10.67□□□□□ -0.7
SLIRP-212ENST00000613856 SPTBN1Q01082 2364 aaKnown RBP10.66□□□□□ -0.7
SLIRP-212ENST00000613856 C9J4A7 227 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 ACOT8O14734 319 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 TNFRSF21O75509 655 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 STK17BO94768 372 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 RECKO95980 971 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 ZGLP1P0C6A0 271 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 NT5EP21589 574 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 SOX18P35713 384 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 ANXA11P50995 505 aaKnown RBP10.66□□□□□ -0.7
SLIRP-212ENST00000613856 EFNA3P52797 238 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 MGAT2Q10469 447 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 KCNAB2Q13303 367 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 TRIM25Q14258 630 aaKnown RBP10.66□□□□□ -0.7
SLIRP-212ENST00000613856 MINDY4Q4G0A6 757 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 VWA2Q5GFL6 755 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 TMEM164Q5U3C3 297 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 C1orf146Q5VVC0 180 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 ERICH5Q6P6B1 374 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 C6orf120Q7Z4R8 191 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 RNF130Q86XS8 419 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 GALNT12Q8IXK2 581 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 CLEC4FQ8N1N0 589 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 C10orf111Q8N326 155 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 VWA5B2Q8N398 1253 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 RNF148Q8N7C7 305 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 OR2T12Q8NG77 320 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 OR7G2Q8NG99 324 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 SLC35G5Q96KT7 338 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 PTCHD1Q96NR3 888 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 SPSB2Q99619 263 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 ADAP2Q9NPF8 381 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 DDX18Q9NVP1 670 aaKnown RBP10.66□□□□□ -0.7
SLIRP-212ENST00000613856 THUMPD1Q9NXG2 353 aaKnown RBP10.66□□□□□ -0.7
SLIRP-212ENST00000613856 ZNF639Q9UID6 485 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 PACSIN3Q9UKS6 424 aa10.66□□□□□ -0.7
SLIRP-212ENST00000613856 C19orf53Q9UNZ5 99 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-212ENST00000613856 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ELOVL7A1L3X0 281 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 UPK1AO00322 258 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ASNA1O43681 348 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 CNOT3O75175 753 aaKnown RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 COQ9O75208 318 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 BCAS2O75934 225 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 SORBS2O94875 1100 aaKnown RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 C1QCP02747 245 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 CD63P08962 238 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 PTGER1P34995 402 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 CASRP41180 1078 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 KHKP50053 298 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 OR4D2P58180 307 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ACTR3P61158 418 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ELF3P78545 371 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 MRPS35P82673 323 aaKnown RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 RBBP4Q09028 425 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 TP53BP2Q13625 1128 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 NCF4Q15080 339 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ELAVL1Q15717 326 aaKnown RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 CYP51A1Q16850 503 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 COX20Q5RI15 118 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 EXOSC6Q5RKV6 272 aaKnown RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms