RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	PRRC2A	P48634	2157 aa	Known RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508		A0A1B0GTL3	188 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	ICOSLG	O75144	302 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	KRT38	O76015	456 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	CBX7	O95931	251 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	INHBA	P08476	426 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	HSD3B1	P14060	373 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	CD99	P14209	185 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	KRT15	P19012	456 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	CTSS	P25774	331 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	HSD3B2	P26439	372 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	OPRM1	P35372	400 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	ARL1	P40616	181 aa	Predicted RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	PTGDS	P41222	190 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	PPIC	P45877	212 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	DCAF7	P61962	342 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	PSPH	P78330	225 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	CKAP4	Q07065	602 aa	Known RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	DCST1	Q5T197	706 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	UBAP2	Q5T6F2	1119 aa	Known RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	TTC19	Q6DKK2	380 aa	Predicted RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	LETMD1	Q6P1Q0	360 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	TAOK1	Q7L7X3	1001 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	MILR1	Q7Z6M3	343 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	ADGRE4P	Q86SQ3	457 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	CDC20B	Q86Y33	519 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	OR1J4	Q8NGS1	313 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	ABTB1	Q969K4	478 aa	Predicted RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	TM4SF18	Q96CE8	201 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	LCOR	Q96JN0	433 aa	Predicted RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	ZNF681	Q96N22	645 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	ZFP3	Q96NJ6	502 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	ALPK1	Q96QP1	1244 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	PAFAH2	Q99487	392 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	MRPL46	Q9H2W6	279 aa	Known RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	LIME1	Q9H400	295 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	METTL7A	Q9H8H3	244 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	FARSB	Q9NSD9	589 aa	Known RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	SNX6	Q9UNH7	406 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	SLC12A4	Q9UP95	1085 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	EXO1	Q9UQ84	846 aa	Known RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	CAMK2A	Q9UQM7	478 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	GPR55	Q9Y2T6	319 aa	Predicted RBP	10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	SLC6A5	Q9Y345	797 aa		10.15	□□□□□ -0.78
CBWD1-222	ENST00000613508	ABCA4	P78363	2273 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	FRG2C	A6NGY1	282 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	TUBAL3	A6NHL2	446 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	OR6C70	A6NIJ9	312 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	PPP6C	O00743	305 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	SNPH	O15079	494 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	CBR3	O75828	277 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	PDYN	P01213	254 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	SBK3	P0C264	359 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	EPX	P11678	715 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	DNASE1	P24855	282 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	DEK	P35659	375 aa	Known RBP	10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	EMD	P50402	254 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	WNT3	P56703	355 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	SNTB1	Q13884	538 aa	Known RBP	10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	RCAN2	Q14206	197 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	EIPR1	Q53HC9	387 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	SGO1	Q5FBB7	561 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	FAM111B	Q6SJ93	734 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	ANGPTL8	Q6UXH0	198 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	CAMKMT	Q7Z624	323 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	PRR22	Q8IZ63	422 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	WDSUB1	Q8N9V3	476 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	ZNF675	Q8TD23	568 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	RNF138	Q8WVD3	245 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	OMA1	Q96E52	524 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	CNRIP1	Q96F85	164 aa	Predicted RBP	10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	BTBD9	Q96Q07	612 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	TRIB1	Q96RU8	372 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	FAIM2	Q9BWQ8	316 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	OSBPL11	Q9BXB4	747 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	ITPA	Q9BY32	194 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	OR2B2	Q9GZK3	357 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	VPS29	Q9UBQ0	182 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	PRODH2	Q9UF12	536 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	TRPS1	Q9UHF7	1281 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	ZNF225	Q9UK10	706 aa		10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.14	□□□□□ -0.79
CBWD1-222	ENST00000613508	FREM3	P0C091	2139 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	PRAMEF25	A6NGN4	478 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508		A8MT66	165 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	GNB5	O14775	395 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	UGT2B11	O75310	529 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	BCAS2	O75934	225 aa	Predicted RBP	10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	CYP4B1	P13584	511 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	DRD2	P14416	443 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	FOSL1	P15407	271 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	KLK2	P20151	261 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	TACR1	P25103	407 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	GCK	P35557	465 aa		10.13	□□□□□ -0.79
CBWD1-222	ENST00000613508	HSD17B3	P37058	310 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms