RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ARHGAP10A1A4S6 786 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 BLACEA4D250 179 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 SAC3D1A6NKF1 404 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 CLDN4O14493 209 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 PRMT3O60678 531 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 B4GALT2O60909 372 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 CDC123O75794 336 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-217ENST00000611848 PRSS23O95084 383 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 RASAL1O95294 804 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 PABPC4LP0CB38 370 aaKnown RBP8.26□□□□□ -1.09
SMAD4-217ENST00000611848 SFTPCP11686 197 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 TACR1P25103 407 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 PTPN6P29350 595 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 BSGP35613 385 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 GZMMP51124 257 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 RHAGQ02094 409 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 GK3PQ14409 553 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 DCAF10Q5QP82 559 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 NOXRED1Q6NXP6 359 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 NDUFAF7Q7L592 441 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 NUDT13Q86X67 352 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 CALHM3Q86XJ0 350 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 ZNF595Q8IYB9 648 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 METTL4Q8N3J2 472 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 CBR4Q8N4T8 237 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 CLEC1AQ8NC01 280 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 C7orf57Q8NEG2 295 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 OR11G2Q8NGC1 345 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 C11orf24Q96F05 449 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-217ENST00000611848 ITCHQ96J02 903 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 PTCHD1Q96NR3 888 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 CHID1Q9BWS9 393 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 ZNF717Q9BY31 904 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-217ENST00000611848 RBCK1Q9BYM8 510 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 IKZF5Q9H5V7 419 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 KAT8Q9H7Z6 458 aaKnown RBP8.26□□□□□ -1.09
SMAD4-217ENST00000611848 ATP13A2Q9NQ11 1180 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 PRDM9Q9NQV7 894 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 KCMF1Q9P0J7 381 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 VPS29Q9UBQ0 182 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-217ENST00000611848 PHF11Q9UIL8 331 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 FBXL4Q9UKA2 621 aa8.26□□□□□ -1.09
SMAD4-217ENST00000611848 FAM220BPB1ANY3 271 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 MKRN2OSH3BPM6 223 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CYR61O00622 381 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 ATXN7O15265 892 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 HPP00738 406 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 LDLRP01130 860 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 TFAP2AP05549 437 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 COX6A1P12074 109 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PRPS1L1P21108 318 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CPN2P22792 545 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 TLX1P31314 330 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 S100A3P33764 101 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 BUD31P41223 144 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 EFNA3P52797 238 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 HSD17B7P56937 341 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 SOX8P57073 446 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 EEF1A2Q05639 463 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 AIMP2Q13155 320 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 SLAMF1Q13291 335 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 APOFQ13790 326 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 NSDHLQ15738 373 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CPZQ66K79 652 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 FAAH2Q6GMR7 532 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 MRM1Q6IN84 353 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 FKBP9P1Q75LS8 142 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CPEB2Q7Z5Q1 589 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 SHISA5Q8N114 240 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 OR2T12Q8NG77 320 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CLHC1Q8NHS4 586 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 POP5Q969H6 163 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 C8orf44Q96CB5 159 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 TSSK3Q96PN8 268 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 MAPKAP1Q9BPZ7 522 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CPPED1Q9BRF8 314 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 THUMPD3Q9BV44 507 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 SORBS1Q9BX66 1292 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 MRPS26Q9BYN8 205 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 YIPF3Q9GZM5 350 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 ZNF700Q9H0M5 742 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PIF1Q9H611 641 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 RMND5AQ9H871 391 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PRTFDC1Q9NRG1 225 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 LYARQ9NX58 379 aaKnown RBP8.25□□□□□ -1.09
SMAD4-217ENST00000611848 NDUFA13Q9P0J0 144 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 FBXW2Q9UKT8 454 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 OAZ3Q9UMX2 235 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PCDHB14Q9Y5E9 798 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 PCSK5Q92824 1860 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 IGHV1-45A0A0A0MS14 117 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 A0A0A6YYD5 115 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 NSG1A0A0A6YYJ2 146 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 SMIM31A0A1B0GVY4 71 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 ELOVL7A1L3X0 281 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 OR2W5A6NFC9 320 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 FAM227AF5H4B4 570 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 UPK1AO00322 258 aa8.25□□□□□ -1.09
SMAD4-217ENST00000611848 CLOCKO15516 846 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms