RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 C10orf62Q5T681 223 aaPredicted RBP20.1■□□□□ 0.81
CBWD3-207ENST00000611426 RTL4Q6ZR62 310 aa20.1■□□□□ 0.81
CBWD3-207ENST00000611426 RBM18Q96H35 190 aaKnown RBP20.1■□□□□ 0.81
CBWD3-207ENST00000611426 DGAT2Q96PD7 388 aa20.1■□□□□ 0.81
CBWD3-207ENST00000611426 MTERF1Q99551 399 aaKnown RBP20.1■□□□□ 0.81
CBWD3-207ENST00000611426 RPF2Q9H7B2 306 aaKnown RBP20.1■□□□□ 0.81
CBWD3-207ENST00000611426 PLSCR2Q9NRY7 297 aa20.1■□□□□ 0.81
CBWD3-207ENST00000611426 RNF11Q9Y3C5 154 aa20.1■□□□□ 0.81
CBWD3-207ENST00000611426 CSMD2Q7Z408 3487 aa20.1■□□□□ 0.81
CBWD3-207ENST00000611426 ADGRG4Q8IZF6 3080 aa20.1■□□□□ 0.81
CBWD3-207ENST00000611426 FAM166BA8MTA8 275 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 G3V3Y1 287 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 MANBAO00462 879 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 FGF17O60258 216 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 LINC00032P0C843 101 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 ELAVL4P26378 380 aaKnown RBP20.09■□□□□ 0.81
CBWD3-207ENST00000611426 PIK3R1P27986 724 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 KIR3DL1P43629 444 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 STT3AP46977 705 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 BIKQ13323 160 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 GSTA3Q16772 222 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 TMEM211Q6ICI0 200 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 OPN5Q6U736 354 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 Q6ZSR9 355 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 GPR180Q86V85 440 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 ZNF721Q8TF20 911 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 TANKQ92844 425 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 SENP5Q96HI0 755 aaPredicted RBP20.09■□□□□ 0.81
CBWD3-207ENST00000611426 SGCZQ96LD1 299 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 TRIM8Q9BZR9 551 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 PCDHGA11Q9Y5H2 935 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 HRH3Q9Y5N1 445 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 PTGDR2Q9Y5Y4 395 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 OTOGQ6ZRI0 2925 aa20.09■□□□□ 0.81
CBWD3-207ENST00000611426 ANKRD65E5RJM6 399 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 SLC28A1O00337 649 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 DYRK3O43781 588 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 ULK1O75385 1050 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 ALDOCP09972 364 aaKnown RBP20.08■□□□□ 0.81
CBWD3-207ENST00000611426 PCSK2P16519 638 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 CNR1P21554 472 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 PRPH2P23942 346 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 PTX3P26022 381 aaPredicted RBP20.08■□□□□ 0.81
CBWD3-207ENST00000611426 TLX1P31314 330 aaPredicted RBP20.08■□□□□ 0.81
CBWD3-207ENST00000611426 HTR6P50406 440 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 GK5Q6ZS86 529 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 SLC22A16Q86VW1 577 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 GOLM1Q8NBJ4 401 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 OR2T11Q8NH01 316 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 RP9Q8TA86 221 aaKnown RBP20.08■□□□□ 0.81
CBWD3-207ENST00000611426 PPWD1Q96BP3 646 aaKnown RBP20.08■□□□□ 0.81
CBWD3-207ENST00000611426 TUBGCP3Q96CW5 907 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 FAM173AQ9BQD7 235 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 TTTY12Q9BZ98 90 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 TP63Q9H3D4 680 aaPredicted RBP20.08■□□□□ 0.81
CBWD3-207ENST00000611426 DMRT3Q9NQL9 472 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 SDR39U1Q9NRG7 319 aaPredicted RBP20.08■□□□□ 0.81
CBWD3-207ENST00000611426 PHF11Q9UIL8 331 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 SNX6Q9UNH7 406 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 TSC22D4Q9Y3Q8 395 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 ZNF407Q9C0G0 2248 aa20.08■□□□□ 0.81
CBWD3-207ENST00000611426 EML6Q6ZMW3 1958 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 A0A0G2JMM0 328 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 ATP6AP2A0A1C7CYW4 349 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 A0A1W2PPB8 328 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 A0A1W2PRS3 328 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 KIR3DP1A8MWS1 328 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 H0YIV9 168 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 PLPP1O14494 284 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 ZNF354AO60765 605 aaPredicted RBP20.08■□□□□ 0.8
CBWD3-207ENST00000611426 ATP6AP2O75787 350 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 COX4I1P13073 169 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 IDO1P14902 403 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 NR0B1P51843 470 aaKnown RBP20.08■□□□□ 0.8
CBWD3-207ENST00000611426 RPS13P62277 151 aaKnown RBP20.08■□□□□ 0.8
CBWD3-207ENST00000611426 ERVK-8P63133 956 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 PHEXP78562 749 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 IGLV3-21P80748 117 aaPredicted RBP20.08■□□□□ 0.8
CBWD3-207ENST00000611426 MPEG1Q2M385 716 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 TCHHL1Q5QJ38 904 aaPredicted RBP20.08■□□□□ 0.8
CBWD3-207ENST00000611426 NDUFAF5Q5TEU4 345 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 C18orf63Q68DL7 685 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 ZNF295-AS1Q8N0V1 137 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 ZCCHC7Q8N3Z6 543 aaKnown RBP20.08■□□□□ 0.8
CBWD3-207ENST00000611426 REPS1Q96D71 796 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 PPP3R2Q96LZ3 170 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 BTBD10Q9BSF8 475 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 BRINP2Q9C0B6 783 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 SACM1LQ9NTJ5 587 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 ASIC5Q9NY37 505 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 ATG4BQ9Y4P1 393 aa20.08■□□□□ 0.8
CBWD3-207ENST00000611426 P04436 131 aa20.07■□□□□ 0.8
CBWD3-207ENST00000611426 ARL1P40616 181 aaPredicted RBP20.07■□□□□ 0.8
CBWD3-207ENST00000611426 ARFIP1P53367 373 aa20.07■□□□□ 0.8
CBWD3-207ENST00000611426 PLIN5Q00G26 463 aa20.07■□□□□ 0.8
CBWD3-207ENST00000611426 TNFRSF17Q02223 184 aa20.07■□□□□ 0.8
CBWD3-207ENST00000611426 FOLH1Q04609 750 aa20.07■□□□□ 0.8
CBWD3-207ENST00000611426 MAPRE2Q15555 327 aa20.07■□□□□ 0.8
CBWD3-207ENST00000611426 CPSF6Q16630 551 aaKnown RBP eCLIP20.07■□□□□ 0.8
CBWD3-207ENST00000611426 PIGGQ5H8A4 983 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms