RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HBA1P69905 142 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 KLF10Q13118 480 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 JMJD6Q6NYC1 403 aaPredicted RBP17.48■□□□□ 0.39
CCDC9-205ENST00000600117 RNF111Q6ZNA4 994 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 GK5Q6ZS86 529 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 MSANTD1Q6ZTZ1 278 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 C9orf40Q8IXQ3 194 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 OR2L13Q8N349 312 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 TEX19Q8NA77 164 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 OR52R1Q8NGF1 315 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 OR8K3Q8NH51 312 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 BRIX1Q8TDN6 353 aaKnown RBP17.48■□□□□ 0.39
CCDC9-205ENST00000600117 VPS33AQ96AX1 596 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 CCDC115Q96NT0 180 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 MYLK2Q9H1R3 596 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 OR10A5Q9H207 317 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 CXorf36Q9H7Y0 433 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 SERHLQ9NQF3 203 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 NTMQ9P121 344 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 PTGFRNQ9P2B2 879 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 BTNL2Q9UIR0 455 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 C19orf53Q9UNZ5 99 aaPredicted RBP17.48■□□□□ 0.39
CCDC9-205ENST00000600117 TP53TG5Q9Y2B4 290 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 ARL2BPQ9Y2Y0 163 aa17.48■□□□□ 0.39
CCDC9-205ENST00000600117 ASPDHA6ND91 283 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 A6NL46 340 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 UPK1AO00322 258 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 NR5A2O00482 541 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 PSMG1O95456 288 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 GPC1P35052 558 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 SOX11P35716 441 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 RNF4P78317 190 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 MYBPC3Q14896 1274 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 HSDL2Q6YN16 418 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 MTERF4Q7Z6M4 381 aaKnown RBP17.47■□□□□ 0.39
CCDC9-205ENST00000600117 ARMC10Q8N2F6 343 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 VPS37AQ8NEZ2 397 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 FDCSPQ8NFU4 85 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 SSC4DQ8WTU2 575 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 SPDL1Q96EA4 605 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 NPAS2Q99743 824 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 INPP5KQ9BT40 448 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 ZNF552Q9H707 407 aaPredicted RBP17.47■□□□□ 0.39
CCDC9-205ENST00000600117 NEUROD4Q9HD90 331 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 MRGBPQ9NV56 204 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC9-205ENST00000600117 TAS2R9Q9NYW1 312 aa17.47■□□□□ 0.39
CCDC9-205ENST00000600117 OTOGQ6ZRI0 2925 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 OR6C76A6NM76 312 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 CFLARO15519 480 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 CCDC22O60826 627 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 BCAS2O75934 225 aaPredicted RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 ZFAND5O76080 213 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 ABCB1P08183 1280 aaPredicted RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 ADSLP30566 484 aaPredicted RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 UQCRFS1P47985 274 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 EMDP50402 254 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 KCNK10P57789 538 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 EBPQ15125 230 aaKnown RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 TLR1Q15399 786 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 VPS26BQ4G0F5 336 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 B3GNTL1Q67FW5 361 aaPredicted RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 TMEM64Q6YI46 380 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 MTDHQ86UE4 582 aaKnown RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 SIRT6Q8N6T7 355 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 GOT1L1Q8NHS2 421 aaPredicted RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 C16orf52Q8NHV5 167 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 FAM120BQ96EK7 910 aaKnown RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 DEFB126Q9BYW3 111 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 DDX18Q9NVP1 670 aaKnown RBP17.46■□□□□ 0.39
CCDC9-205ENST00000600117 GPR83Q9NYM4 423 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 ARMCX1Q9P291 453 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 BCAP29Q9UHQ4 241 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 VPS4AQ9UN37 437 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 DTX4Q9Y2E6 619 aa17.46■□□□□ 0.39
CCDC9-205ENST00000600117 CCDC154A6NI56 674 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 SLC22A2O15244 555 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 EMC8O43402 210 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 MAN1A2O60476 641 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 PRAMEF2O60811 474 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 NME6O75414 186 aaPredicted RBP17.45■□□□□ 0.38
CCDC9-205ENST00000600117 CPSF4O95639 269 aaKnown RBP17.45■□□□□ 0.38
CCDC9-205ENST00000600117 CDKN2CP42773 168 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 LRRC74AQ0VAA2 488 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 RAPSNQ13702 412 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 GKAP1Q5VSY0 366 aaPredicted RBP17.45■□□□□ 0.38
CCDC9-205ENST00000600117 FCRLBQ6BAA4 426 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 TCTN3Q6NUS6 607 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 ANKS4BQ8N8V4 417 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 ZNF441Q8N8Z8 693 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 GALNT11Q8NCW6 608 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 OR4A15Q8NGL6 344 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 NUBPLQ8TB37 319 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 SFXN5Q8TD22 340 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 TSPEARQ8WU66 669 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 GTF2H4Q92759 462 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 MAGED4Q96JG8 741 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 CCDC106Q9BWC9 280 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 WWTR1Q9GZV5 400 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 PCDHGA9Q9Y5G4 932 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms