RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 PCBP3P57721 371 aaKnown RBP14.42□□□□□ -0.1
UPF1-204ENST00000596842 RAB14P61106 215 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 MPP7Q5T2T1 576 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 FAM83HQ6ZRV2 1179 aaPredicted RBP14.42□□□□□ -0.1
UPF1-204ENST00000596842 ZNF438Q7Z4V0 828 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 CPXM2Q8N436 756 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 CHAC2Q8WUX2 184 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 TFGQ92734 400 aaPredicted RBP14.42□□□□□ -0.1
UPF1-204ENST00000596842 RIT1Q92963 219 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 CAPN10Q9HC96 672 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 SPHK2Q9NRA0 654 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 CACNA1CQ13936 2221 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 FAM183AA6NL82 134 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 RAB36O95755 333 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 GIPRP48546 466 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 RHAGQ02094 409 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 KRT33BQ14525 404 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 GPR19Q15760 415 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 SYT14P1Q58G82 188 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 NANOGP1Q8N7R0 232 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 TEX47Q8TBZ9 253 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 SLC35G5Q96KT7 338 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 TTTY10Q9BZA0 68 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 ZNF304Q9HCX3 659 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 TDP1Q9NUW8 608 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 NTNG1Q9Y2I2 539 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 PCYT1BQ9Y5K3 369 aaPredicted RBP14.42□□□□□ -0.1
UPF1-204ENST00000596842 HYKKA2RU49 373 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 HMGN4O00479 90 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 RB1P06400 928 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 MESP2Q0VG99 397 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 ILKQ13418 452 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 PLPP4Q5VZY2 271 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 CNIH2Q6PI25 160 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 IL20RBQ6UXL0 311 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 CAMKMTQ7Z624 323 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 MARCH9Q86YJ5 346 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 FAM46AQ96IP4 442 aaKnown RBP14.42□□□□□ -0.1
UPF1-204ENST00000596842 TAPBPLQ9BX59 468 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 C3orf14Q9HBI5 128 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 TMEM39AQ9NV64 488 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 GSTK1Q9Y2Q3 226 aa14.42□□□□□ -0.1
UPF1-204ENST00000596842 ISM1B1AKI9 464 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 NPIPB8E9PQR5 432 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 PI15O43692 258 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 B4GALT2O60909 372 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 OLFM2O95897 454 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 KIR2DL3P43628 341 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 RFX3P48380 749 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 BTBD16Q32M84 506 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 FNDC3BQ53EP0 1204 aaKnown RBP14.41□□□□□ -0.1
UPF1-204ENST00000596842 ZNF730Q6ZMV8 503 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 NOXA1Q86UR1 476 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 TM9SF4Q92544 642 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 PDXPQ96GD0 296 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 MIXL1Q9H2W2 232 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 SLC9A8Q9Y2E8 581 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 FAAHO00519 579 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 WDR5P61964 334 aaKnown RBP14.41□□□□□ -0.1
UPF1-204ENST00000596842 CSTF1Q05048 431 aaKnown RBP14.41□□□□□ -0.1
UPF1-204ENST00000596842 CDK10Q15131 360 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 TATDN3Q17R31 274 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 SLX4IPQ5VYV7 408 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 ZNF770Q6IQ21 691 aaPredicted RBP14.41□□□□□ -0.1
UPF1-204ENST00000596842 AKAP1Q92667 903 aaKnown RBP eCLIP14.41□□□□□ -0.13e-7■■■■■ 28.2
UPF1-204ENST00000596842 ZNF689Q96CS4 500 aaPredicted RBP14.41□□□□□ -0.1
UPF1-204ENST00000596842 PPIL1Q9Y3C6 166 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 HELZP42694 1942 aaKnown RBP14.41□□□□□ -0.1
UPF1-204ENST00000596842 A0A075B6Q4 140 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 TMPRSS11DO60235 418 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 PCCBP05166 539 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 IL32P24001 234 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 GPR4P46093 362 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 SLC7A9P82251 487 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 TCEAL5Q5H9L2 206 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 UNC5DQ6UXZ4 953 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 YIPF7Q8N8F6 280 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 PROKR2Q8NFJ6 384 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 POF1BQ8WVV4 589 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 SLC7A6Q92536 515 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 CXorf40BQ96DE9 158 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 NARFLQ9H6Q4 476 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 TRIM45Q9H8W5 580 aaPredicted RBP14.41□□□□□ -0.1
UPF1-204ENST00000596842 RNF121Q9H920 327 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 IMP3Q9NV31 184 aaKnown RBP14.41□□□□□ -0.1
UPF1-204ENST00000596842 PCDHGB2Q9Y5G2 931 aa14.41□□□□□ -0.1
UPF1-204ENST00000596842 A0A1W2PS29 197 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 B4DXG7 233 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 DPM1O60762 260 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 KLHL18O94889 574 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 YES1P07947 543 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 DDCP20711 480 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 WASP42768 502 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 GPLD1P80108 840 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 LRRC32Q14392 662 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 SLC35F1Q5T1Q4 408 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 LCN1P1Q5VSP4 162 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 KHDRBS2Q5VWX1 349 aaKnown RBP14.4□□□□□ -0.1
UPF1-204ENST00000596842 VN1R5Q7Z5H4 357 aa14.4□□□□□ -0.1
UPF1-204ENST00000596842 ZNF557Q8N988 423 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms