RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 ZC3HC1Q86WB0 502 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 C17orf64Q86WR6 236 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 IZUMO1Q8IYV9 350 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 GPATCH11Q8N954 259 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 ZNF740Q8NDX6 193 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 FBXO36Q8NEA4 188 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 CATSPER1Q8NEC5 780 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 OR4K1Q8NGD4 311 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 FAM45AQ8TCE6 357 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 ST8SIA4Q92187 359 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 MOCOSQ96EN8 888 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 SNF8Q96H20 258 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 PDLIM5Q96HC4 596 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 IMMP1LQ96LU5 166 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 C16orf45Q96MC5 204 aaPredicted RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 AGAP4Q96P64 663 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 KRT12Q99456 494 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 ZNF747Q9BV97 191 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 MKKSQ9NPJ1 570 aaPredicted RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 PPANQ9NQ55 473 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 SMYD2Q9NRG4 433 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 C14orf105Q9NVL8 296 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 UTP6Q9NYH9 597 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 CORO1CQ9ULV4 474 aaPredicted RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 SNX24Q9Y343 169 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 SVILO95425 2214 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 UNC79Q9P2D8 2635 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 POLEQ07864 2286 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 DOPEY1Q5JWR5 2465 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 NSG1A0A0A6YYJ2 146 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 IGHV3-20A0A0C4DH32 117 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 PRSS47A8MTI9 375 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 H0YIG0 161 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 SGK494L7N484 410 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 CDC7O00311 574 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 PRPF4O43172 522 aaKnown RBP eCLIP7.02□□□□□ -1.29
VMP1-213ENST00000591877 WDR47O94967 919 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 WISP3O95389 354 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 GUCA1CO95843 209 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 C1QAP02745 245 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 SERPINA7P05543 415 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 HEXBP07686 556 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 ANXA5P08758 320 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 HIST1H2AGP0C0S8 130 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 GP1BBP13224 206 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 ZNF37AP17032 561 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 HIST1H2ADP20671 130 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 AVPR1BP47901 424 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 DGKQP52824 942 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 AP1S2P56377 157 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 TAS2R39P59534 338 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 CDSNQ15517 529 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 NDUFA9Q16795 377 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 SPDYE7PQ495Y7 208 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 DUPD1Q68J44 220 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 HIST2H2BCQ6DN03 193 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 CAPN13Q6MZZ7 669 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 ISLR2Q6UXK2 745 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 LINC00696Q6ZRV3 163 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 LANCL3Q6ZV70 420 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 USP51Q70EK9 711 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 NDUFAF7Q7L592 441 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 ASPGQ86U10 573 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 DTX2Q86UW9 622 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 CEP97Q8IW35 865 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 PALM2Q8IXS6 379 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 MFSD9Q8NBP5 474 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 ABHD11Q8NFV4 315 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 OR51Q1Q8NH59 317 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 GABPB2Q8TAK5 448 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 ZCCHC10Q8TBK6 192 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 ANKRD49Q8WVL7 239 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 TM9SF4Q92544 642 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 NEIL2Q969S2 332 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 FBXL8Q96CD0 374 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 RUNDC3BQ96NL0 473 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 CYTH2Q99418 400 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 H2AFJQ9BTM1 129 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 SSBP3Q9BWW4 388 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 VN1R1Q9GZP7 353 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 ILKAPQ9H0C8 392 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 PCBD2Q9H0N5 130 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 CHODLQ9H9P2 273 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 GALNT9Q9HCQ5 603 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 ARL15Q9NXU5 204 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 GRHL1Q9NZI5 618 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 HCN3Q9P1Z3 774 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 PTGFRNQ9P2B2 879 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 UBE2J1Q9Y385 318 aaPredicted RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 COPG1Q9Y678 874 aaKnown RBP7.02□□□□□ -1.29
VMP1-213ENST00000591877 CENPEQ02224 2701 aa7.02□□□□□ -1.29
VMP1-213ENST00000591877 CROCCQ5TZA2 2017 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 TEX15Q9BXT5 2789 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 TRBC2A0A5B9 178 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 ZNF860A6NHJ4 632 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 ZAR1LA6NP61 321 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 A8MVJ9 347 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 C4orf51C9J302 202 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms