RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 HIST1H2AGP0C0S8 130 aaPredicted RBP12.41□□□□□ -0.42
DNMT1-207ENST00000586588 LIMS3P0CW19 117 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 LIMS4P0CW20 117 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 HIST1H2ADP20671 130 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 HAAOP46952 286 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 SRP9P49458 86 aaKnown RBP12.41□□□□□ -0.42
DNMT1-207ENST00000586588 DGKGP49619 791 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 RPS7P62081 194 aaKnown RBP12.41□□□□□ -0.42
DNMT1-207ENST00000586588 TAF12Q16514 161 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 C6orf132Q5T0Z8 1188 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 HECTD3Q5T447 861 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 HIST2H2AA3Q6FI13 130 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 BMPERQ8N8U9 685 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 LKAAEAR1Q8TD35 194 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 FOXJ1Q92949 421 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 C11orf24Q96F05 449 aaPredicted RBP12.41□□□□□ -0.42
DNMT1-207ENST00000586588 ZFP42Q96MM3 310 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 DDOQ99489 341 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 SLC38A3Q99624 504 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 HIST1H2AJQ99878 128 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 SPRTNQ9H040 489 aaPredicted RBP12.41□□□□□ -0.42
DNMT1-207ENST00000586588 SAP130Q9H0E3 1048 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 FN3KQ9H479 309 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 CACNG4Q9UBN1 327 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 VPS29Q9UBQ0 182 aa12.41□□□□□ -0.42
DNMT1-207ENST00000586588 TRPM7Q96QT4 1865 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 CARNS1A5YM72 827 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 OR10H3O60404 316 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 PRAF2O60831 178 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 SNAI1O95863 264 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 APOC3P02656 99 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 NFYAP23511 347 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 SMSP52788 366 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 FOXD4Q12950 439 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 GRIN2CQ14957 1233 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 IDNKQ5T6J7 187 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 ARMC12Q5T9G4 340 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 TRIM40Q6P9F5 258 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 ANGPTL8Q6UXH0 198 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 IKBIPQ70UQ0 350 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 SLC30A8Q8IWU4 369 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 CDH26Q8IXH8 852 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 BEST4Q8NFU0 473 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 OR4D10Q8NGI6 311 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 ELMOD3Q96FG2 381 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 C12orf66Q96MD2 445 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 ABHD1Q96SE0 405 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 CINPQ9BW66 212 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 CLCA2Q9UQC9 943 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 PATJQ8NI35 1801 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 ZNF593O00488 134 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 GPR39O43194 453 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 PRODHO43272 600 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 CHST10O43529 356 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 EFCAB14O75071 495 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 EIF4EP06730 217 aaKnown RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 IDSP22304 550 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 ELAVL4P26378 380 aaKnown RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 CCND3P30281 292 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 RGRP47804 291 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 LIM2P55344 173 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 KIAA1024LP59773 190 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 SHC2P98077 582 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 SLC22A10Q63ZE4 541 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 SLC27A4Q6P1M0 643 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 PGBD2Q6P3X8 592 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 CAMKVQ8NCB2 501 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 GPR26Q8NDV2 337 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 COQ8AQ8NI60 647 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 APOBEC4Q8WW27 367 aaKnown RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 MRPS24Q96EL2 167 aaKnown RBP12.4□□□□□ -0.42
DNMT1-207ENST00000586588 RNFT2Q96EX2 444 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 TMED9Q9BVK6 235 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 ABCG4Q9H172 646 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 ARL15Q9NXU5 204 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 MARK1Q9P0L2 795 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 IL17CQ9P0M4 197 aa12.4□□□□□ -0.42
DNMT1-207ENST00000586588 UPK3BL1B0FP48 263 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 UPK3BL2E5RIL1 263 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 CBX7O95931 251 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 ALDOBP05062 364 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 SRPRAP08240 638 aaKnown RBP12.39□□□□□ -0.43
DNMT1-207ENST00000586588 JUPP14923 745 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 ADCYAP1R1P41586 468 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 RPIAP49247 311 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 DSC1Q08554 894 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 FAM209BQ5JX69 171 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 CD300LDQ6UXZ3 194 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 DNAJB7Q7Z6W7 309 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-207ENST00000586588 SLITRK4Q8IW52 837 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 PDZD9Q8IXQ8 264 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 CDC26Q8NHZ8 85 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 GTF3C2Q8WUA4 911 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-207ENST00000586588 GPR63Q9BZJ6 419 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 TBC1D17Q9HA65 648 aa12.39□□□□□ -0.43
DNMT1-207ENST00000586588 ANGPT4Q9Y264 503 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms