RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 PLA2G2CQ5R387 149 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 PHF19Q5T6S3 580 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 C1orf189Q5VU69 101 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 YOD1Q5VVQ6 348 aaPredicted RBP9.83□□□□□ -0.84
SS18-217ENST00000580958 OR2T5Q6IEZ7 315 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 PIWIL3Q7Z3Z3 882 aaKnown RBP9.83□□□□□ -0.84
SS18-217ENST00000580958 TMEM179BQ7Z7N9 219 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 OR2T29Q8NH02 315 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 OR5K1Q8NHB7 308 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 BBS10Q8TAM1 723 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 ADAMTS15Q8TE58 950 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 MVB12AQ96EY5 273 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 SLC35A4Q96G79 324 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 C7orf34Q96L11 122 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 ZNF597Q96LX8 424 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 COL21A1Q96P44 957 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 GFM1Q96RP9 751 aaKnown RBP9.83□□□□□ -0.84
SS18-217ENST00000580958 TREX2Q9BQ50 279 aaPredicted RBP9.83□□□□□ -0.84
SS18-217ENST00000580958 ALOXE3Q9BYJ1 711 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 BCL2L10Q9HD36 194 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 ADAP2Q9NPF8 381 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 NECTIN3Q9NQS3 549 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 BAG5Q9UL15 447 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 RAB26Q9ULW5 256 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 ZNF451Q9Y4E5 1061 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 PCDHGB2Q9Y5G2 931 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 CLDN16Q9Y5I7 305 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 MAGED1Q9Y5V3 778 aaPredicted RBP9.83□□□□□ -0.84
SS18-217ENST00000580958 AP4B1Q9Y6B7 739 aa9.83□□□□□ -0.84
SS18-217ENST00000580958 LNP1A1A4G5 178 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 PRAMEF25A6NGN4 478 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 CLDN4O14493 209 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 PLOD3O60568 738 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 E2F6O75461 281 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 MFN2O95140 757 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 BMP10O95393 424 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 CBX7O95931 251 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 MAOAP21397 527 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 DCTP40126 519 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 GRK6P43250 576 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 STT3AP46977 705 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 OR1E2P47887 323 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 CRISP3P54108 245 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 HSD17B7P56937 341 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 ZNF155Q12901 538 aaPredicted RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 DUSP8Q13202 625 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 DAG1Q14118 895 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 GNA13Q14344 377 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 LAPTM4AQ15012 233 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 DUSP5Q16690 384 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 CLPPQ16740 277 aaPredicted RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 IQCCQ4KMZ1 466 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 OTUD3Q5T2D3 398 aaPredicted RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 C6orf52Q5T4I8 152 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 ATAD3BQ5T9A4 648 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 ARHGAP40Q5TG30 622 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 C16orf62Q7Z3J2 963 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 TSEN54Q7Z6J9 526 aaKnown RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 STK32CQ86UX6 486 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 ARMC8Q8IUR7 673 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 SLITRK4Q8IW52 837 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 ST13P4Q8IZP2 240 aaPredicted RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 HS3ST5Q8IZT8 346 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 SVOPLQ8N434 492 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 SLC16A11Q8NCK7 471 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 GPR32P1Q8NGA4 272 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 GEMIN6Q8WXD5 167 aaKnown RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 SLC9A6Q92581 669 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 CDS1Q92903 461 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 CTHRC1Q96CG8 243 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 DGAT2Q96PD7 388 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 OR6C1Q96RD1 312 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 ZNF607Q96SK3 696 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 RSPO3Q9BXY4 272 aaPredicted RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 CXorf21Q9HAI6 301 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 ZNF304Q9HCX3 659 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 C11orf16Q9NQ32 467 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 C8orf4Q9NR00 106 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 LANCL2Q9NS86 450 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 SIDT1Q9NXL6 827 aaKnown RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 GIN1Q9NXP7 522 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 RARRES3Q9UL19 164 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 PADI2Q9Y2J8 665 aa9.82□□□□□ -0.84
SS18-217ENST00000580958 GPC6Q9Y625 555 aaPredicted RBP9.82□□□□□ -0.84
SS18-217ENST00000580958 A0A0G2JPF8 293 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 A0A1B0GX78 115 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 DUXAA6NLW8 204 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 HNRNPCL2B2RXH8 293 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 HNRNPCL3B7ZW38 293 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 D6RAR5 112 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 G3V2T6 193 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 HRKO00198 91 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 NTN3O00634 580 aaPredicted RBP9.81□□□□□ -0.84
SS18-217ENST00000580958 DLGAP1O14490 977 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 SERPINB7O75635 380 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 H6PDO95479 791 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 RECKO95980 971 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 AGR2O95994 175 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 ALOX5P09917 674 aa9.81□□□□□ -0.84
SS18-217ENST00000580958 HNRNPCL4P0DMR1 293 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms